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L3_083_119G1_scaffold_409

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_119G1_scaffold_409_1
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(2..538)
DNA (537bp) protein (179aa)
Metal dependent phosphohydrolase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R1V2_9FIRM
Metal dependent phosphohydrolase {ECO:0000313|EMBL:CDC42838.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Metal dependent phosphohydrolase
L3_083_119G1_scaffold_409_2
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(542..1042)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:52 RepID=R6H5C1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB21482.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
valyl-tRNA synthetase
L3_083_119G1_scaffold_409_3
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1206..1718)
DNA (513bp) protein (171aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
Phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0NFU4_9CLOT
L3_083_119G1_scaffold_409_4
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1822..3312)
DNA (1491bp) protein (497aa)
MobA/MobL family n=3 Tax=Clostridiales RepID=D6E499_9FIRM
MobA/MobL family.
MobA/MobL family {ECO:0000313|EMBL:CCX81700.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
L3_083_119G1_scaffold_409_5
unknown

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comp(3520..3711)
DNA (192bp) protein (64aa)

This feature has no annotations

L3_083_119G1_scaffold_409_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3708..4283)
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JLX6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK92811.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_083_119G1_scaffold_409_7
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4292..5230)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KQK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS48466.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
hypothetical protein
L3_083_119G1_scaffold_409_8
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5249..5626)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6KZX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB80828.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
hypothetical protein
L3_083_119G1_scaffold_409_9
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5646..6668)
DNA (1023bp) protein (341aa)
ParB-like partition protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LBA2_9FIRM
ParB-like partition protein {ECO:0000313|EMBL:CDB80829.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
ParB-like partition proteins
L3_083_119G1_scaffold_409_10
unknown

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comp(6848..6991)
DNA (144bp) protein (48aa)

This feature has no annotations

L3_083_119G1_scaffold_409_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6967..8382)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IV98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44274.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
TrmA family RNA methyltransferase
L3_083_119G1_scaffold_409_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8798..10591)
DNA (1794bp) protein (598aa)
Peptidase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5T7_9CLOT
Peptidase {ECO:0000313|EMBL:CCY44272.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
creatinase
L3_083_119G1_scaffold_409_13
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10679..12103)
DNA (1425bp) protein (475aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Dihydrolipoyl dehydrogenase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EMJ2_9FIRM
dihydrolipoamide dehydrogenase
L3_083_119G1_scaffold_409_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12115..12906)
DNA (792bp) protein (264aa)
Cof-like hydrolase n=6 Tax=Clostridium clostridioforme RepID=N9V7L3_9CLOT
Cof-like hydrolase {ECO:0000313|EMBL:ENZ58403.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
cof family hydrolase
L3_083_119G1_scaffold_409_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13559..14350)
DNA (792bp) protein (264aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9W0R6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ66019.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Sugar phosphate isomerases/epimerases
L3_083_119G1_scaffold_409_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14319..15497)
DNA (1179bp) protein (393aa)
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) (EC:3.6.3.21)
Maltose/maltodextrin ABC transporter ATP-binding protein n=7 Tax=Clostridium clostridioforme RepID=N9XLR8_9CLOT
Maltose/maltodextrin ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ20188.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_083_119G1_scaffold_409_17
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15538..16362)
DNA (825bp) protein (275aa)
sn-glycerol 3-phosphate ABC transporter permease n=9 Tax=Clostridium RepID=N9XA08_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF23961.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_083_119G1_scaffold_409_18
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16352..17242)
DNA (891bp) protein (297aa)
Multiple sugar ABC transporter permease n=6 Tax=Clostridium clostridioforme RepID=N9WTY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB62110.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
ABC transporter
L3_083_119G1_scaffold_409_19
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17377..18801)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JTM5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB62109.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_083_119G1_scaffold_409_20
unknown

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comp(19040..19177)
DNA (138bp) protein (46aa)

This feature has no annotations

L3_083_119G1_scaffold_409_21
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19246..20430)
DNA (1185bp) protein (395aa)
Gamma-D-glutamyl-L-lysine endopeptidase {ECO:0000313|EMBL:KJJ75203.1}; EC=3.4.-.- {ECO:0000313|EMBL:KJJ75203.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HRK9_9CLOT
Cell wall-associated hydrolases (invasion-associated proteins)
L3_083_119G1_scaffold_409_22
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20446..21360)
DNA (915bp) protein (305aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase n=7 Tax=Clostridium RepID=A8S1C1_9CLOT
L3_083_119G1_scaffold_409_23
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21597..22340
DNA (744bp) protein (248aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVS8_9FIRM
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EEQ62231.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
short-chain dehydrogenase/reductase SDR
L3_083_119G1_scaffold_409_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22513..22965
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J6U3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44766.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
surface protein PspC
L3_083_119G1_scaffold_409_25
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23061..24293)
DNA (1233bp) protein (411aa)
Transporter, CPA2 family n=1 Tax=Clostridium sp. M62/1 RepID=D4CAV3_9CLOT
Transporter, CPA2 family {ECO:0000313|EMBL:EFE13378.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
sodium/hydrogen exchanger
L3_083_119G1_scaffold_409_26
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24339..24980)
DNA (642bp) protein (214aa)
Transcriptional regulator n=2 Tax=Clostridium RepID=D6DLQ0_CLOSC
Transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFE13379.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L3_083_119G1_scaffold_409_27
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25164..25916)
DNA (753bp) protein (251aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
tRNA pseudouridine synthase A n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVS0_9FIRM
pseudouridylate synthase I
L3_083_119G1_scaffold_409_28
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25929..26729)
DNA (801bp) protein (267aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8S1C7_9CLOT
Cobalt/nickel ABC transporter permease {ECO:0000313|EMBL:ENZ48793.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
ABC-type cobalt transport system, permease component CbiQ and related transporters
L3_083_119G1_scaffold_409_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26729..27598)
DNA (870bp) protein (290aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5K5_9CLOT
ABC transporter
L3_083_119G1_scaffold_409_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27667..28518)
DNA (852bp) protein (284aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5X7_9CLOT
ABC-type cobalt transport system, ATPase component
Displaying items 1-30 of 35 in total

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