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L3_083_119G1_scaffold_418

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_119G1_scaffold_418_1
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..86)
DNA (84bp) protein (28aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=R2SPK3_ENTFL
Uncharacterized protein {ECO:0000313|EMBL:CDC75408.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L3_083_119G1_scaffold_418_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(120..644)
DNA (525bp) protein (175aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=G6BU08_CLODI
Uncharacterized protein {ECO:0000313|EMBL:ETD17885.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_083_119G1_scaffold_418_3
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(718..1089)
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=G6BU09_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCX58374.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
L3_083_119G1_scaffold_418_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1365..1784)
DNA (420bp) protein (140aa)
DNA-binding helix-turn-helix protein n=4 Tax=Clostridiales RepID=B6FNJ2_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEA82394.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted transcriptional regulator
L3_083_119G1_scaffold_418_5
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1798..2298
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=V8BX16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD19659.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Predicted transcriptional regulator
L3_083_119G1_scaffold_418_6
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2557..2937
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=G6BU11_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDE22703.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
L3_083_119G1_scaffold_418_7
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2992..3465
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=A8RAX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE22704.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
L3_083_119G1_scaffold_418_8
unknown

Not on your lists

3698..3907
DNA (210bp) protein (70aa)

This feature has no annotations

L3_083_119G1_scaffold_418_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3932..4192
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTM4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80613.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_083_119G1_scaffold_418_10
Clostridium sp. CAG:557, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4536..4715
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:557 RepID=R6GSF9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB24181.1}; TaxID=1262819 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:557.;"
L3_083_119G1_scaffold_418_11
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4759..5463
DNA (705bp) protein (235aa)
LytTr DNA-binding domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NHP0_CLOSV
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EDS05876.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L3_083_119G1_scaffold_418_12
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5474..6793
DNA (1320bp) protein (440aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WPZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75913.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_083_119G1_scaffold_418_13
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6968..7576
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WPZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75912.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Putative accessory gene regulator protein B
L3_083_119G1_scaffold_418_14
unknown

Not on your lists

7539..7700
DNA (162bp) protein (54aa)

This feature has no annotations

L3_083_119G1_scaffold_418_15
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7762..8451
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BKT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15405.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Rhs family protein
L3_083_119G1_scaffold_418_16
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8574..8990
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AGR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81343.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
hypothetical protein
L3_083_119G1_scaffold_418_17
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8984..9322
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R5X792_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA04211.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
Transposase and inactivated derivatives
L3_083_119G1_scaffold_418_18
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9465..11105
DNA (1641bp) protein (547aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AGR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81341.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
Transposase and inactivated derivatives
L3_083_119G1_scaffold_418_19
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11211..19874
DNA (8664bp) protein (2888aa)
Rhs family protein n=3 Tax=root RepID=D4J5Z0_9FIRM
Rhs family protein
Rhs family protein {ECO:0000313|EMBL:CBK79761.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_083_119G1_scaffold_418_20
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19877..20221
DNA (345bp) protein (115aa)
Transposase mutator type n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MM20_CLOSA
Transposase {ECO:0000313|EMBL:KHS57643.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
transposase mutator type
L3_083_119G1_scaffold_418_21
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20733..21422
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Coprococcus catus GD/7 RepID=D4J5Z2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK79763.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_083_119G1_scaffold_418_22
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21435..22061
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WIK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06659.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_083_119G1_scaffold_418_23
unknown

Not on your lists

23002..23214
DNA (213bp) protein (71aa)

This feature has no annotations

L3_083_119G1_scaffold_418_24
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23241..24149)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2ANG1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ25974.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L3_083_119G1_scaffold_418_25
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24245..24691
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JTV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS34652.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L3_083_119G1_scaffold_418_26
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24695..26164
DNA (1470bp) protein (490aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Probable endonuclease 4 n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FVI2_9FIRM
deoxyribonuclease IV
L3_083_119G1_scaffold_418_27
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26210..27613
DNA (1404bp) protein (468aa)
Long-chain acyl-CoA synthetases (AMP-forming) (EC:6.2.1.3)
AMP-binding enzyme n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2G6_9CLOT
AMP-binding enzyme {ECO:0000313|EMBL:CDE70434.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_083_119G1_scaffold_418_28
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27645..27878
DNA (234bp) protein (78aa)
Acyl carrier protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A9U3_9CLOT
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
acyl carrier protein
L3_083_119G1_scaffold_418_29
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27883..31557
DNA (3675bp) protein (1225aa)
Tyrocidine synthase 3 n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MRV2_9CLOT
tycC2; tyrocidine synthase 3
Tyrocidine synthase 3 {ECO:0000313|EMBL:AGF57476.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_083_119G1_scaffold_418_30
unknown

Not on your lists

comp(31827..31928)
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 30 items

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