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L3_083_119G1_scaffold_424

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_119G1_scaffold_424_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(671..1354)
DNA (684bp) protein (228aa)
Sporulation protein YunB n=5 Tax=Firmicutes RepID=E4LRW3_9CLOT
Sporulation protein YunB {ECO:0000313|EMBL:EQJ52317.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_083_119G1_scaffold_424_2
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1470..2147)
DNA (678bp) protein (226aa)
TrkA N-terminal domain protein n=7 Tax=Firmicutes RepID=E4LRW4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY86221.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
putative Ktr system potassium uptake protein A
L3_083_119G1_scaffold_424_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2160..3557)
DNA (1398bp) protein (466aa)
Potassium uptake protein, TrkH family n=4 Tax=Firmicutes RepID=E4LRW5_9CLOT
Potassium uptake , TrkH family protein {ECO:0000313|EMBL:EQJ52319.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
putative Ktr system potassium uptake protein B
L3_083_119G1_scaffold_424_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3803..4339)
DNA (537bp) protein (179aa)
Rubrerythrin n=8 Tax=Firmicutes RepID=E2SKA9_9FIRM
Rubrerythrin family protein {ECO:0000313|EMBL:EQJ52321.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
rubrerythrin
L3_083_119G1_scaffold_424_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4675..6768
DNA (2094bp) protein (698aa)
Glutamate--ammonia ligase, catalytic domain protein n=4 Tax=Firmicutes RepID=E4LRX0_9CLOT
Glutamine synthetase, catalytic domain protein {ECO:0000313|EMBL:EQJ52324.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
glutamine synthetase
L3_083_119G1_scaffold_424_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6992..8665
DNA (1674bp) protein (558aa)
Na/Pi-cotransporter II-like protein n=5 Tax=Firmicutes RepID=E4LRX1_9CLOT
Na+/Pi-cotransporter family protein {ECO:0000313|EMBL:EQJ52325.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Na/Pi-cotransporter
L3_083_119G1_scaffold_424_7
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9468..11135
DNA (1668bp) protein (556aa)
Na/Pi-cotransporter II-like protein n=4 Tax=Firmicutes RepID=E4LRX3_9CLOT
Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:EFR38516.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Na/Pi-cotransporter
L3_083_119G1_scaffold_424_8
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11416..11889
DNA (474bp) protein (158aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LRX4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC84851.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_083_119G1_scaffold_424_9
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11831..12301
DNA (471bp) protein (157aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1BF97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC84853.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_083_119G1_scaffold_424_10
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12495..13019)
DNA (525bp) protein (175aa)
Acetyltransferase, GNAT family n=5 Tax=Firmicutes RepID=E4LRX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC84854.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_083_119G1_scaffold_424_11
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13075..14277)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LRX7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR38329.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
permease
L3_083_119G1_scaffold_424_12
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(14347..15996)
DNA (1650bp) protein (550aa)
NAD+ synthetase n=2 Tax=Erysipelotrichaceae RepID=H1AUF1_9FIRM
NAD+ synthetase {ECO:0000313|EMBL:CDC84858.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
nadE; NAD(+) synthase
L3_083_119G1_scaffold_424_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16120..16851
DNA (732bp) protein (244aa)
putative RNA methyltransferase (EC:2.1.1.-)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1AUF2_9FIRM
RNA 2'-O ribose methyltransferase substrate binding family protein {ECO:0000313|EMBL:EQJ52334.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_083_119G1_scaffold_424_14
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17018..17758)
DNA (741bp) protein (247aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1AUF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC84862.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_083_119G1_scaffold_424_15
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17755..18081)
DNA (327bp) protein (109aa)
Rhodanese-like protein n=7 Tax=Firmicutes RepID=E4LRY1_9CLOT
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Rhodanese-related sulfurtransferase
L3_083_119G1_scaffold_424_16
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18091..18435)
DNA (345bp) protein (115aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LRY2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC84865.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_083_119G1_scaffold_424_17
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18437..18874)
DNA (438bp) protein (146aa)
Peptidyl-prolyl cis-trans isomerase B {ECO:0000313|EMBL:EFR38305.1}; EC=5.2.1.8 {ECO:0000313|EMBL:EFR38305.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Peptidyl-prolyl cis-trans isomerase B n=5 Tax=Firmicutes RepID=E4LRY3_9CLOT
ppiB; peptidyl-prolyl cis-trans isomerase
L3_083_119G1_scaffold_424_18
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19026..19991)
DNA (966bp) protein (322aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1AUF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC84868.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_083_119G1_scaffold_424_19
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20269..21129
DNA (861bp) protein (287aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1AUF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC84869.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_083_119G1_scaffold_424_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21408..22109)
DNA (702bp) protein (234aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LRY7_9CLOT
Inhibitor of apoptosis-promoting Bax1 family protein {ECO:0000313|EMBL:EQJ52343.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_083_119G1_scaffold_424_21
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22186..22938)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1AUG0_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:KGJ53125.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
L3_083_119G1_scaffold_424_22
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22953..23780)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1AUG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC84874.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_083_119G1_scaffold_424_23
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24232..24699)
DNA (468bp) protein (156aa)
UPF0178 protein HMPREF0982_00919 n=2 Tax=Erysipelotrichaceae RepID=H1AUG2_9FIRM
UPF0178 protein BN746_03189 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_083_119G1_scaffold_424_24
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24671..25870)
DNA (1200bp) protein (400aa)
putative threonine dehydratase (EC:4.3.1.19)
Threonine dehydratase n=2 Tax=Erysipelotrichaceae RepID=H1AUG3_9FIRM
Threonine dehydratase {ECO:0000313|EMBL:CDC84877.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_083_119G1_scaffold_424_25
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26178..27878)
DNA (1701bp) protein (567aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=G1VLH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY86199.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L3_083_119G1_scaffold_424_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(28408..30102)
DNA (1695bp) protein (565aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00173448};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
prolyl-tRNA synthetase, family II (EC:6.1.1.15)
Proline--tRNA ligase n=5 Tax=Firmicutes RepID=E4LRZ4_9CLOT
L3_083_119G1_scaffold_424_27
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(30196..30882)
DNA (687bp) protein (229aa)
Collagenase and related proteases (EC:3.4.-.-)
Peptidase, U32 family n=2 Tax=Firmicutes RepID=E4LRZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGX77230.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
L3_083_119G1_scaffold_424_28
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30927..31010
DNA (84bp) protein (28aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1348563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Namur str. 05-2929.;"
Lysine--tRNA ligase n=5 Tax=Escherichia coli RepID=M8TFC4_ECOLX
lysS; lysyl-tRNA synthetase
Displaying 28 items

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