name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L3_083_119G1_scaffold_427_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
2..1132
|
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Threonine--tRNA ligase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WI23_BIFBI
|
|
L3_083_119G1_scaffold_427_2
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
1374..4556
|
nagZ; beta-n-acetylhexosaminidase NagZ (EC:3.2.1.52)
Chitobiase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GMY9_9BIFI
Chitobiase {ECO:0000313|EMBL:CDB23019.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
|
|
L3_083_119G1_scaffold_427_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
4835..5593
|
Probable transcriptional regulatory protein BBIF_0962 n=8 Tax=Bifidobacterium RepID=E3EP60_BIFBS
hypothetical protein
Probable transcriptional regulatory protein B216_06936 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
|
|
L3_083_119G1_scaffold_427_4
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
5600..6181
|
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Crossover junction endodeoxyribonuclease RuvC n=7 Tax=Bifidobacterium RepID=E3EP59_BIFBS
ruvC; crossover junction endodeoxyribonuclease ruvC
|
|
L3_083_119G1_scaffold_427_5
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
6357..6974
|
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Holliday junction ATP-dependent DNA helicase RuvA n=6 Tax=Bifidobacterium RepID=E3EP57_BIFBS
ruvA; holliday junction DNA helicase
|
|
L3_083_119G1_scaffold_427_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
6981..8066
|
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Holliday junction ATP-dependent DNA helicase RuvB n=2 Tax=Bifidobacterium RepID=E3EP56_BIFBS
ruvB; Holliday junction DNA helicase RuvB
|
|
L3_083_119G1_scaffold_427_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
8127..8552
|
YajC Protein translocase subunit n=4 Tax=Bifidobacterium bifidum RepID=E4NX06_BIFBP
yajC; YajC Protein translocase subunit
Preprotein translocase subunit YajC {ECO:0000313|EMBL:EKF16142.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
|
|
L3_083_119G1_scaffold_427_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
8570..9151
|
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Adenine phosphoribosyltransferase n=5 Tax=Bifidobacterium RepID=E3EP54_BIFBS
apt; adenine phosphoribosyltransferase
|
|
L3_083_119G1_scaffold_427_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
9236..10441
|
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA synthetase beta chain {ECO:0000313|EMBL:AFL04527.1}; EC=6.2.1.5 {ECO:0000313|EMBL:AFL04527.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Succinyl-CoA synthetase beta chain n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WI14_BIFBI
|
|
L3_083_119G1_scaffold_427_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
10438..11364
|
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2INF2_BIFBI
sucD; succinyl-CoA synthetase alpha chain
|
|
L3_083_119G1_scaffold_427_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
11361..12722
|
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I653_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50269.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
|
|
L3_083_119G1_scaffold_427_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
12670..14301
|
purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH (EC:3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HS99_BIFBI
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
|
|
L3_083_119G1_scaffold_427_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
14394..14687
|
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=I3WI10_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53156.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
|
|
L3_083_119G1_scaffold_427_14
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(14667..15572)
|
Major intrinsic protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2H8F6_BIFBI
major intrinsic protein
Major intrinsic protein {ECO:0000313|EMBL:CDB23007.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
|
|
L3_083_119G1_scaffold_427_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
15739..16515
|
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Pseudouridine synthase n=8 Tax=Bifidobacterium RepID=E3EP47_BIFBS
rluB; ribosomal large subunit pseudouridine synthase B
|
|
L3_083_119G1_scaffold_427_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
16512..18647
|
Ribosome biogenesis GTPase Der n=2 Tax=Bifidobacterium bifidum RepID=E4V9T5_BIFBI
GTPase Der {ECO:0000256|SAAS:SAAS00038180}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
GTP-binding protein
|
|
L3_083_119G1_scaffold_427_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
18846..20933
|
trpBC; bifunctional protein, includes tryptophan synthase subunit beta and indole-3-glycerol phosphate synthase (EC:4.2.1.20)
Indole-3-glycerol phosphate synthase {ECO:0000256|SAAS:SAAS00046689}; EC=4.1.1.48 {ECO:0000256|SAAS:SAAS00046705};; EC=4.2.1.20 {ECO:0000256|SAAS:SAAS00015859};; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
TrpBC TrpB/TrpC bifunctional protein, includes tryptophan synthase beta chain and indole-3-glycerol phosphate synthase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NWZ6_BIFBP
|
|
L3_083_119G1_scaffold_427_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
20966..21838
|
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Tryptophan synthase alpha chain n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HUV5_BIFBI
trpA; tryptophan synthase subunit alpha
|
|
L3_083_119G1_scaffold_427_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
21936..22928
|
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Prolipoprotein diacylglyceryl transferase n=2 Tax=Bifidobacterium bifidum RepID=E4NWZ4_BIFBP
lgt; prolipo protein diacylglyceryl transferase
|
|
L3_083_119G1_scaffold_427_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
23056..23721
|
rpe; ribulose-phosphate 3-epimerase Rpe (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Ribulose-phosphate 3-epimerase n=9 Tax=Bifidobacterium RepID=E3EP42_BIFBS
|
|
L3_083_119G1_scaffold_427_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
23833..24096
|
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Phosphoribosyl-ATP pyrophosphatase n=8 Tax=Bifidobacterium RepID=E3EP41_BIFBS
hisE; phosphoribosyl-ATP pyrophosphohydrolase
|
|
L3_083_119G1_scaffold_427_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
24131..24982
|
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
ATP phosphoribosyltransferase n=7 Tax=Bifidobacterium RepID=E3EP40_BIFBS
hisG; ATP phosphoribosyltransferase
|
|
L3_083_119G1_scaffold_427_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
24999..25652
|
pgsA; putativeCDP-diacylglycerol--glycerol-3-phosphate3-phosphatidyl-transferase (EC:2.7.8.5)
PgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:KFI43037.1}; EC=2.7.8.5 {ECO:0000313|EMBL:KFI43037.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
PutativeCDP-diacylglycerol--glycerol-3-phosphate3-phosphatidyl-transferase n=3 Tax=Bifidobacterium bifidum RepID=I3WI00_BIFBI
|
|
L3_083_119G1_scaffold_427_24
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
25642..26613
|
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6GFJ6_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB23180.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
|
|
L3_083_119G1_scaffold_427_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
26614..26946
|
Small basic protein n=8 Tax=Bifidobacterium RepID=E4NWY8_BIFBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE50255.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
|
|
L3_083_119G1_scaffold_427_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
26953..27774
|
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I644_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50254.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
|
|
L3_083_119G1_scaffold_427_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
27780..28217
|
Signal transduction protein GarA n=4 Tax=Bifidobacterium bifidum RepID=E3EP35_BIFBS
garA; putative signal transduction protein
Oxoglutarate dehydrogenase inhibitor {ECO:0000313|EMBL:EFR50366.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
|
|
L3_083_119G1_scaffold_427_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
28312..28986
|
Transcriptional regulator n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HUU9_BIFBI
Transcriptional regulator {ECO:0000313|EMBL:EKE50252.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
transcriptional regulator
|
|
L3_083_119G1_scaffold_427_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
29001..29378
|
Anaerobic C4-dicarboxylate transport protein n=3 Tax=Bifidobacterium bifidum RepID=I3WHZ4_BIFBI
anaerobic C4-dicarboxylate transport protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53140.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
|
|
L3_083_119G1_scaffold_427_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
29587..29844
|
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=I3WHZ3_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL04506.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
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