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L3_083_119G1_scaffold_431

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_119G1_scaffold_431_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(79..1023)
DNA (945bp) protein (315aa)
Type IV secretory system Conjugative DNA transfer family protein n=1 Tax=Clostridium difficile P28 RepID=T4NMN9_CLODI
Type IV secretory system Conjugative DNA transfer family protein {ECO:0000313|EMBL:EQJ57001.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
conjugal transfer protein TraG
L3_083_119G1_scaffold_431_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1010..1204)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NNJ2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ57000.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_083_119G1_scaffold_431_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1208..2125)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NNP0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ56999.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_083_119G1_scaffold_431_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2130..2903)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NI25_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ56998.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_083_119G1_scaffold_431_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2908..3600)
DNA (693bp) protein (231aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Clostridium difficile P28 RepID=T4NNV3_CLODI
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EQJ56997.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
relaxase
L3_083_119G1_scaffold_431_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3615..4277)
DNA (663bp) protein (221aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Clostridium difficile P28 RepID=T4NNV3_CLODI
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EQJ56997.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_083_119G1_scaffold_431_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4283..4612)
DNA (330bp) protein (110aa)
Ribbon-helix-helix , copG family protein n=1 Tax=Clostridium difficile P28 RepID=T4NMN5_CLODI
Ribbon-helix-helix , copG family protein {ECO:0000313|EMBL:EQJ56996.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Bacterial mobilisation protein (MobC)./Ribbon-helix-helix protein, copG family.
L3_083_119G1_scaffold_431_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4717..4932)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NNI9_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ56995.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_083_119G1_scaffold_431_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5020..5373)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NNN6_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ56994.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_083_119G1_scaffold_431_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5386..5772)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NI19_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ56993.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_083_119G1_scaffold_431_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5859..6347)
DNA (489bp) protein (163aa)
Acetyltransferase family protein n=1 Tax=Clostridium difficile P28 RepID=T4NNU9_CLODI
Acetyltransferase family protein {ECO:0000313|EMBL:EQJ56992.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
acetyltransferase
L3_083_119G1_scaffold_431_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6433..7380)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NMN1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ56991.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_083_119G1_scaffold_431_13
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7382..7693)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=[Eubacterium] cylindroides ATCC 27803 RepID=U2R7Z6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK46827.1}; TaxID=649755 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides ATCC 27803.;"
L3_083_119G1_scaffold_431_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7721..8473)
DNA (753bp) protein (251aa)
Superfamily II DNA and RNA helicase n=1 Tax=Clostridium difficile P28 RepID=T4NNI5_CLODI
Superfamily II DNA and RNA helicase {ECO:0000313|EMBL:EQJ56990.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_083_119G1_scaffold_431_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8483..10375)
DNA (1893bp) protein (631aa)
HNH endonuclease domain protein (EC:3.1.25.-)
Reverse transcriptase family protein n=1 Tax=Clostridium difficile P28 RepID=T4NNN2_CLODI
Reverse transcriptase family protein {ECO:0000313|EMBL:EQJ56989.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_083_119G1_scaffold_431_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10927..18810)
DNA (7884bp) protein (2628aa)
Methyltransferase domain protein n=1 Tax=Clostridium difficile P28 RepID=T4NI13_CLODI
Methyltransferase domain protein {ECO:0000313|EMBL:EQJ56988.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
putative helicase
L3_083_119G1_scaffold_431_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19388..20008)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NNU5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ56987.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_083_119G1_scaffold_431_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20359..21081)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NMM6_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ56986.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
DNA primase (bacterial type)
L3_083_119G1_scaffold_431_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21091..21801)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NNI0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ56985.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_083_119G1_scaffold_431_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21798..22589)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NNM8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ56984.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_083_119G1_scaffold_431_21
unknown

Not on your lists

comp(22595..22777)
DNA (183bp) protein (61aa)

This feature has no annotations

L3_083_119G1_scaffold_431_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22802..22909)
DNA (108bp) protein (36aa)
Putative membrane protein n=1 Tax=Clostridium difficile P28 RepID=T4NI08_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQJ56983.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_083_119G1_scaffold_431_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22920..27485)
DNA (4566bp) protein (1522aa)
LPXTG cell wall anchor domain protein n=1 Tax=Clostridium difficile P28 RepID=T4NNU2_CLODI
LPXTG cell wall anchor domain protein {ECO:0000313|EMBL:EQJ56982.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Cna protein B-type domain.
L3_083_119G1_scaffold_431_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27544..28275)
DNA (732bp) protein (244aa)
Cysteine-rich secretory family protein n=1 Tax=Clostridium difficile P28 RepID=T4NMM2_CLODI
Cysteine-rich secretory family protein {ECO:0000313|EMBL:EQJ56981.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
gerHA; spore germination protein
L3_083_119G1_scaffold_431_25
unknown

Not on your lists

comp(28318..28434)
DNA (117bp) protein (39aa)

This feature has no annotations

L3_083_119G1_scaffold_431_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28650..29603)
DNA (954bp) protein (318aa)
ParB/RepB/Spo0J family partition domain protein n=1 Tax=Clostridium difficile P28 RepID=T4NNH6_CLODI
ParB/RepB/Spo0J family partition domain protein {ECO:0000313|EMBL:EQJ56980.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
plasmid stablization protein ParB
L3_083_119G1_scaffold_431_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29560..30276)
DNA (717bp) protein (239aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=1 Tax=Clostridium difficile P28 RepID=T4NNM4_CLODI
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EQJ56979.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
chromosome partitioning protein ParA
Displaying 27 items

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