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L3_083_119G1_scaffold_487

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_119G1_scaffold_487_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

240..503
DNA (264bp) protein (88aa)
integrase n=1 Tax=Bifidobacterium breve RepID=UPI0003722449
Uncharacterized protein {ECO:0000313|EMBL:ERI87796.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
IS3 family transposase
L3_083_119G1_scaffold_487_2
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(637..1302)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Nocardiopsis lucentensis RepID=UPI00034B65F7
HTH-type transcriptional regulator AcrR {ECO:0000313|EMBL:KJL31231.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
transcriptional regulator
L3_083_119G1_scaffold_487_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1469..3802)
DNA (2334bp) protein (778aa)
beta-glucosidase (EC:3.2.1.21)
beta-glucosidase n=1 Tax=Salinispora pacifica RepID=UPI000362F748
Uncharacterized protein {ECO:0000313|EMBL:KEY30700.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L3_083_119G1_scaffold_487_4
Leucobacter komagatae, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3828..4685)
DNA (858bp) protein (286aa)
Peptide ABC transporter, ATP-binding protein n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9W7Z2_9ACTO
Leucobacter komagatae strain VKM ST2845 L_komagatae_06, whole genome shotgun sequence {ECO:0000313|EMBL:KIP52831.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
ABC transporter ATP-binding protein
L3_083_119G1_scaffold_487_5
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4678..5613)
DNA (936bp) protein (312aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X9E0_9PSEU
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHR50305.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
peptide ABC transporter ATPase
L3_083_119G1_scaffold_487_6
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5610..6431)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI000346A071
Uncharacterized protein {ECO:0000313|EMBL:KJY36224.1}; TaxID=1609133 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
binding-protein-dependent transport system inner membrane protein
L3_083_119G1_scaffold_487_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6424..7401)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000380712A
Uncharacterized protein {ECO:0000313|EMBL:KEY28028.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
putative didpeptide ABC transporter permease protein
L3_083_119G1_scaffold_487_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7445..9004)
DNA (1560bp) protein (520aa)
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI00034CF704
Uncharacterized protein {ECO:0000313|EMBL:KEY28029.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L3_083_119G1_scaffold_487_9
Bifidobacterium subtile, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9556..11031
DNA (1476bp) protein (492aa)
Transposase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AP38_BIFLN
Transposase {ECO:0000313|EMBL:KFJ04001.1}; TaxID=77635 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium subtile.;"
transposase
L3_083_119G1_scaffold_487_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11115..11810)
DNA (696bp) protein (232aa)
Periplasmic binding protein and sugar binding domain of the LacI protein (Fragment) n=1 Tax=Bifidobacterium longum subsp. longum 35B RepID=I3AVW4_BIFLN
Periplasmic binding protein and sugar binding domain of the LacI protein {ECO:0000313|EMBL:EIJ23257.1}; Flags: Fragment;; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_083_119G1_scaffold_487_11
Bifidobacterium minimum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11895..12185
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 178 str. F0338 RepID=E8JI26_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KFI72989.1}; TaxID=1693 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium minimum.;"
hypothetical protein
L3_083_119G1_scaffold_487_12
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12182..13240
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 178 str. F0338 RepID=E8JI26_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KFI94768.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
L3_083_119G1_scaffold_487_13
Bifidobacterium minimum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13206..13466
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 178 str. F0338 RepID=E8JI28_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KFI72991.1}; TaxID=1693 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium minimum.;"
hypothetical protein
L3_083_119G1_scaffold_487_14
Bifidobacterium minimum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13450..14031
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 178 str. F0338 RepID=E8JI26_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KFI72991.1}; TaxID=1693 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium minimum.;"
hypothetical protein
L3_083_119G1_scaffold_487_15
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13925..14287)
DNA (363bp) protein (121aa)
CRISPR-associated protein Cas2 n=1 Tax=Bifidobacterium animalis subsp. animalis (strain ATCC 25527 / DSM 20104 / JCM 1190 / R101-8) RepID=I1WBE1_BIFAR
CRISPR-associated protein Cas2
CRISPR-associated protein Cas2 {ECO:0000313|EMBL:AFI63573.1}; TaxID=703613 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. animalis (strain ATCC 25527 / DSM; 20104 / JCM 1190 / R101-8).;"
L3_083_119G1_scaffold_487_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14355..15368)
DNA (1014bp) protein (338aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R499_BIFLM
hypothetical protein
L3_083_119G1_scaffold_487_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15365..16048)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R498_BIFLM
CRISPR-associated protein Cse3 {ECO:0000313|EMBL:KEY28034.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L3_083_119G1_scaffold_487_18
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16045..16845)
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R497_BIFLM
hypothetical protein
CRISPR-associated protein Cas5 family {ECO:0000313|EMBL:KFI94765.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
L3_083_119G1_scaffold_487_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16853..18028)
DNA (1176bp) protein (392aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R496_BIFLM
CRISPR-associated protein Cse4 {ECO:0000313|EMBL:KEY28035.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L3_083_119G1_scaffold_487_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18148..18822)
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R495_BIFLM
CRISPR-associated protein Cse2 {ECO:0000313|EMBL:KEY28036.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L3_083_119G1_scaffold_487_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18822..19832)
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R494_BIFLM
CRISPR-associated protein Cse1 {ECO:0000313|EMBL:KEY28037.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L3_083_119G1_scaffold_487_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19880..20551)
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R494_BIFLM
CRISPR-associated protein Cse1 {ECO:0000313|EMBL:KEY28037.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L3_083_119G1_scaffold_487_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20538..23750)
DNA (3213bp) protein (1071aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R493_BIFLM
Uncharacterized protein {ECO:0000313|EMBL:KEY28038.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L3_083_119G1_scaffold_487_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23752..24699)
DNA (948bp) protein (316aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Bifidobacterium animalis subsp. animalis (strain ATCC 25527 / DSM 20104 / JCM 1190 / R101-8) RepID=I1W7P6_BIFAR
Fic family protein {ECO:0000313|EMBL:KEY28039.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
filamentation induced by cAMP protein fic
Displaying 24 items

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