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L3_083_119G1_scaffold_527

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_119G1_scaffold_527_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..348
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4SFL1_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL26622.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_083_119G1_scaffold_527_2
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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345..530
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M5V9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL26621.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_083_119G1_scaffold_527_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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623..871
DNA (249bp) protein (83aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A8S624_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDP23116.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_083_119G1_scaffold_527_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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986..2362
DNA (1377bp) protein (459aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
topB; DNA topoisomerase III; Tn1549-like, CTn4-Orf15 (EC:5.99.1.2)
DNA topoisomerase n=2 Tax=Clostridium difficile RepID=T4Q3F8_CLODI
L3_083_119G1_scaffold_527_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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2368..2709
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM42556.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
mobilisation protein
L3_083_119G1_scaffold_527_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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2696..3496
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XH50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45689.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
relaxase/mobilization nuclease domain-containing protein
L3_083_119G1_scaffold_527_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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3439..3966
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM42558.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_083_119G1_scaffold_527_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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3963..4142
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM42559.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_083_119G1_scaffold_527_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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4488..5405
DNA (918bp) protein (306aa)
Site-specific recombinase, phage integrase family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YU90_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EHM42560.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative site-specific recombinase
L3_083_119G1_scaffold_527_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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5402..5638
DNA (237bp) protein (79aa)
Site-specific recombinase, phage integrase family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YU90_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EHM42560.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative site-specific recombinase
L3_083_119G1_scaffold_527_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6050..7810)
DNA (1761bp) protein (587aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
pckG; Phosphoenolpyruvate carboxykinase (EC:4.1.1.32)
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YS58_9FIRM
L3_083_119G1_scaffold_527_12
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7893..9425)
DNA (1533bp) protein (511aa)
citrate lyase subunit alpha (EC:4.1.3.6)
Citrate lyase, alpha subunit n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ANH2_9CLOT
Citrate lyase, alpha subunit {ECO:0000313|EMBL:ERI67384.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_083_119G1_scaffold_527_13
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9431..10297)
DNA (867bp) protein (289aa)
citrate (pro-3S)-lyase (EC:4.1.3.6)
HpcH/HpaI aldolase/citrate lyase family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B585_9CLOT
HpcH/HpaI aldolase/citrate lyase family protein {ECO:0000313|EMBL:ERI67385.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_083_119G1_scaffold_527_14
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10290..10562)
DNA (273bp) protein (91aa)
Putative citrate lyase acyl carrier protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CJ84_9CLOT
Putative citrate lyase acyl carrier protein {ECO:0000313|EMBL:ERI67386.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
citrate lyase acyl carrier protein
L3_083_119G1_scaffold_527_15
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10658..11341)
DNA (684bp) protein (228aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CDQ6_9CLOT
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:ERI67387.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_083_119G1_scaffold_527_16
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11498..12550)
DNA (1053bp) protein (351aa)
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B6H4_9CLOT
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase {ECO:0000313|EMBL:ERI67388.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_083_119G1_scaffold_527_17
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12662..14230)
DNA (1569bp) protein (523aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ANH5_9CLOT
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:ERI67389.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC-type dipeptide transport system, periplasmic component
L3_083_119G1_scaffold_527_18
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14323..15285)
DNA (963bp) protein (321aa)
Oligopeptide ABC transporter, ATP-binding protein OppF n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B589_9CLOT
Oligopeptide ABC transporter, ATP-binding protein OppF {ECO:0000313|EMBL:ERI67390.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
oligopeptide/dipeptide ABC transporter ATPase
L3_083_119G1_scaffold_527_19
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15282..16268)
DNA (987bp) protein (329aa)
Oligopeptide transport ATP-binding protein OppD n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CJ90_9CLOT
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:ERI67391.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
oligopeptide/dipeptide ABC transporter ATPase
L3_083_119G1_scaffold_527_20
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16280..17179)
DNA (900bp) protein (300aa)
Putative dipeptide ABC transporter, permease protein DppC n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CDR1_9CLOT
Putative dipeptide ABC transporter, permease protein DppC {ECO:0000313|EMBL:ERI67392.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
peptide ABC transporter permease
L3_083_119G1_scaffold_527_21
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17166..18134)
DNA (969bp) protein (323aa)
Putative oligopeptide ABC transporter, permease protein AppB n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B6I0_9CLOT
Putative oligopeptide ABC transporter, permease protein AppB {ECO:0000313|EMBL:ERI67393.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC transporter inner membrane protein
L3_083_119G1_scaffold_527_22
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18152..19912)
DNA (1761bp) protein (587aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ANI0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67394.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Predicted aminopeptidases
L3_083_119G1_scaffold_527_23
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21034..21678
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CJ95_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67396.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative site-specific recombinase
L3_083_119G1_scaffold_527_24
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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21720..22352
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8B073_AZOBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCD03582.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
Displaying 24 items

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