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L3_083_119G1_scaffold_536

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_119G1_scaffold_536_1
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2..844
DNA (843bp) protein (281aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
Probable endonuclease 4 n=2 Tax=Firmicutes RepID=E4LPA7_9CLOT
endonuclease IV
L3_083_119G1_scaffold_536_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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846..1211
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1ARX3_9FIRM
Acetyltransferase family protein {ECO:0000313|EMBL:EQJ53801.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_083_119G1_scaffold_536_3
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1683..2747)
DNA (1065bp) protein (355aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=3 Tax=Firmicutes RepID=E4LPA9_9CLOT
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
L3_083_119G1_scaffold_536_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2890..4962
DNA (2073bp) protein (691aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1ARX5_9FIRM
Penicillin binding transpeptidase domain protein {ECO:0000313|EMBL:EQJ53803.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Cell division protein FtsI/penicillin-binding protein 2
L3_083_119G1_scaffold_536_5
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5016..5165
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=8 Tax=Firmicutes RepID=A8RBD4_9FIRM
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
LSU ribosomal protein L33P
L3_083_119G1_scaffold_536_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5228..5815
DNA (588bp) protein (196aa)
Metallo-beta-lactamase domain protein n=7 Tax=Firmicutes RepID=E4LPB1_9CLOT
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:EQJ53804.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
metallo-beta-lactamase
L3_083_119G1_scaffold_536_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5890..6282
DNA (393bp) protein (131aa)
Acetyltransferase, GNAT family n=5 Tax=Firmicutes RepID=E4LPB2_9CLOT
Acetyltransferase family protein {ECO:0000313|EMBL:EQJ53805.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
GNAT family acetyltransferase
L3_083_119G1_scaffold_536_8
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6399..7394
DNA (996bp) protein (332aa)
Type II/IV secretion system protein n=4 Tax=Firmicutes RepID=E4LPB3_9CLOT
Type II/IV secretion system protein {ECO:0000313|EMBL:EFR39408.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
type II secretion system protein E
L3_083_119G1_scaffold_536_9
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7384..8337
DNA (954bp) protein (318aa)
Bacterial type II secretion system domain protein F n=4 Tax=Firmicutes RepID=E4LPB4_9CLOT
Bacterial type II secretion system domain protein F {ECO:0000313|EMBL:EFR39493.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_083_119G1_scaffold_536_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8360..8659
DNA (300bp) protein (100aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=7 Tax=Firmicutes RepID=E4LPB5_9CLOT
ComG operon protein 3 {ECO:0000313|EMBL:EQJ53808.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
competence protein ComGC
L3_083_119G1_scaffold_536_11
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8625..9032
DNA (408bp) protein (136aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=4 Tax=Firmicutes RepID=H1ARY2_9FIRM
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:CDC83371.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_083_119G1_scaffold_536_12
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9149..9568
DNA (420bp) protein (140aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=5 Tax=Firmicutes RepID=E4LPB8_9CLOT
Prepilin-type cleavage/methylation N-terminal domain protein {ECO:0000313|EMBL:EFR39504.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_083_119G1_scaffold_536_13
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9513..9998
DNA (486bp) protein (162aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1ARY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC83369.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_083_119G1_scaffold_536_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10015..10344
DNA (330bp) protein (110aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LPC0_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EQJ53813.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_083_119G1_scaffold_536_15
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10441..11004
DNA (564bp) protein (188aa)
Elongation factor P n=8 Tax=Firmicutes RepID=E2SJ16_9FIRM
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
translation elongation factor P (EF-P)
L3_083_119G1_scaffold_536_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11127..12101
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1ARY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ53815.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_083_119G1_scaffold_536_17
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12104..12760
DNA (657bp) protein (219aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Cytidylate kinase n=5 Tax=Firmicutes RepID=E4LPC3_9CLOT
cytidylate kinase
L3_083_119G1_scaffold_536_18
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12796..14106
DNA (1311bp) protein (437aa)
GTPase Der n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1ARY9_9FIRM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
GTP-binding protein Der
L3_083_119G1_scaffold_536_19
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14109..15110
DNA (1002bp) protein (334aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
glycerol 3-phosphate dehydrogenase (NAD(P)+) (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1ARZ0_9FIRM
L3_083_119G1_scaffold_536_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15287..16879
DNA (1593bp) protein (531aa)
Peptide chain release factor 3 n=5 Tax=Firmicutes RepID=E4LPC6_9CLOT
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
prfC; peptide chain release factor 3
L3_083_119G1_scaffold_536_21
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17037..17219
DNA (183bp) protein (61aa)
[2Fe-2S]-binding domain protein n=7 Tax=Firmicutes RepID=E4LPC7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGX76082.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
NAD(P)H-nitrite reductase
L3_083_119G1_scaffold_536_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17313..18791
DNA (1479bp) protein (493aa)
Stage IV sporulation protein A {ECO:0000256|PIRNR:PIRNR007466}; EC=3.6.1.3 {ECO:0000256|PIRNR:PIRNR007466};; Coat morphogenetic protein SpoIVA {ECO:0000256|PIRNR:PIRNR007466}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Stage IV sporulation protein A n=5 Tax=Firmicutes RepID=G1VNQ8_9FIRM
stage IV sporulation protein A
L3_083_119G1_scaffold_536_23
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18911..19195
DNA (285bp) protein (95aa)
DNA-binding protein HU n=8 Tax=Firmicutes RepID=E2SJ06_9FIRM
DNA-binding protein HU {ECO:0000313|EMBL:EFP62492.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
DNA-binding protein
L3_083_119G1_scaffold_536_24
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19368..20072
DNA (705bp) protein (235aa)
Uncharacterized protein n=3 Tax=unclassified Erysipelotrichaceae RepID=G1VNQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX76079.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
peptidase
L3_083_119G1_scaffold_536_25
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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20350..21552
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1ARZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC83349.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_083_119G1_scaffold_536_26
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21639..21914
DNA (276bp) protein (92aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1ARZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC83347.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_083_119G1_scaffold_536_27
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21816..22034)
DNA (219bp) protein (73aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1ARZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29149.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
Displaying 27 items

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