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L3_083_119G1_scaffold_754

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_119G1_scaffold_754_1
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1262)
DNA (1260bp) protein (420aa)
ABC transporter ATP-binding protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HX64_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:BAR01681.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L3_083_119G1_scaffold_754_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1427..1927)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Bifidobacterium asteroides (strain PRL2011) RepID=K4INT4_BIFAP
Uncharacterized protein {ECO:0000313|EMBL:KEY29918.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L3_083_119G1_scaffold_754_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1970..3127)
DNA (1158bp) protein (386aa)
ABC transporter, permease protein, probably The SpdC antimicrobial peptide resistance efflux pump n=1 Tax=Bifidobacterium asteroides (strain PRL2011) RepID=K4ILH8_BIFAP
Uncharacterized protein {ECO:0000313|EMBL:KEY29917.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
ABC transporter, permease protein, probably The SpdC antimicrobial peptide resistance efflux pump
L3_083_119G1_scaffold_754_4
Bifidobacterium asteroides, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3108..3836)
DNA (729bp) protein (243aa)
ABC transporter, ATP binding protein, probably The SpdC antimicrobial peptide resistance efflux pump (EC:3.6.3.28)
ABC transporter, ATP binding protein, probably The SpdC antimicrobial peptide resistance efflux pump n=1 Tax=Bifidobacterium asteroides (strain PRL2011) RepID=K4IQV8_BIFAP
ABC transporter, ATP binding protein, putative The SpdC antimicrobial peptide resistance efflux pump {ECO:0000313|EMBL:KJY63582.1}; TaxID=1684 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium asteroides.;"
L3_083_119G1_scaffold_754_5
Bifidobacterium asteroides, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3848..4702)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Bifidobacterium asteroides (strain PRL2011) RepID=K4J150_BIFAP
Uncharacterized protein {ECO:0000313|EMBL:KJY63581.1}; TaxID=1684 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium asteroides.;"
hypothetical protein
L3_083_119G1_scaffold_754_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4795..5301
DNA (507bp) protein (169aa)
Major facilitator superfamily MFS_1 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWV3_BIFLJ
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACJ53472.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_083_119G1_scaffold_754_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5656..5880
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GWH2_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KEY29914.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L3_083_119G1_scaffold_754_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5899..6093
DNA (195bp) protein (65aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A8RVE8_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13625.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_083_119G1_scaffold_754_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6090..6776
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HL80_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:KEY29913.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
transcriptional regulator
L3_083_119G1_scaffold_754_10
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6773..7822
DNA (1050bp) protein (350aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
Sensor histidine kinase n=1 Tax=Clostridium sp. CAG:242 RepID=R6CNV4_9CLOT
sensor histidine kinase
L3_083_119G1_scaffold_754_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7895..8578
DNA (684bp) protein (228aa)
ABC transporter, ATP-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJG8_9FIRM
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEY32205.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_083_119G1_scaffold_754_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8575..10383
DNA (1809bp) protein (603aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDL1_9FIRM
ABC transporter permease {ECO:0000313|EMBL:KEY32204.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
ABC transporter permease
L3_083_119G1_scaffold_754_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10833..11294
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=2 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZEN0_EUBR3
hypothetical protein
Sigma-70, region 4 family protein {ECO:0000313|EMBL:EQJ62857.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_083_119G1_scaffold_754_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12487..13176)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QGX2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KEY32202.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L3_083_119G1_scaffold_754_15
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

comp(13177..13401)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BII7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD65322.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
hypothetical protein
L3_083_119G1_scaffold_754_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13513..13740)
DNA (228bp) protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:KEY32201.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L3_083_119G1_scaffold_754_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13795..14271)
DNA (477bp) protein (159aa)
Uncharacterized protein {ECO:0000313|EMBL:KEY32200.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L3_083_119G1_scaffold_754_18
Bifidobacterium callitrichos, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14451..15920)
DNA (1470bp) protein (490aa)
ATPase AAA {ECO:0000313|EMBL:KFI56236.1}; EC=3.6.4.12 {ECO:0000313|EMBL:KFI56236.1};; TaxID=1437609 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium callitrichos DSM 23973.;"
Divergent AAA domain-containing protein n=2 Tax=Eggerthella RepID=E5X8D2_9ACTN
transcriptional regulator
L3_083_119G1_scaffold_754_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16228..16479
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:KEY32199.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L3_083_119G1_scaffold_754_20
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16476..17069
DNA (594bp) protein (198aa)
Xre transcriptional regulator n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2U6_BIFBU
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29161.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
Xre transcriptional regulator
L3_083_119G1_scaffold_754_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17239..18483
DNA (1245bp) protein (415aa)
Integrase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ASM4_BIFLN
Integrase protein
Integrase protein {ECO:0000313|EMBL:AHJ21741.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_083_119G1_scaffold_754_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18867..18989
DNA (123bp) protein (41aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GN64_BIFLS
Uncharacterized protein {ECO:0000313|EMBL:KEY32160.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L3_083_119G1_scaffold_754_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18986..19372
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GN65_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ21739.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_083_119G1_scaffold_754_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19332..19526
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GN65_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY32159.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L3_083_119G1_scaffold_754_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19831..20403)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GN66_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ21738.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_083_119G1_scaffold_754_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20396..20743)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GN67_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ51573.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_083_119G1_scaffold_754_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21056..22342
DNA (1287bp) protein (429aa)
Phage integrase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GN68_BIFLS
Integrase {ECO:0000313|EMBL:KEY32196.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Integrase protein
L3_083_119G1_scaffold_754_28
Bifidobacterium reuteri, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22465..22737)
DNA (273bp) protein (91aa)
Glycosyl hydrolase family 20, catalytic domain protein {ECO:0000313|EMBL:KFI86611.1}; EC=3.2.1.52 {ECO:0000313|EMBL:KFI86611.1};; TaxID=1437610 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium reuteri DSM 23975.;"
Glycoside hydrolase, family 20 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GN69_BIFLS
glycosyl hydrolase
L3_083_119G1_scaffold_754_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22734..23234)
DNA (501bp) protein (167aa)
Glycoside hydrolase, family 20 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GN69_BIFLS
Beta-N-acetylhexosaminidase
Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:AHJ21735.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_083_119G1_scaffold_754_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23341..23628
DNA (288bp) protein (96aa)
Uncharacterized protein {ECO:0000313|EMBL:KEY32194.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Displaying items 1-30 of 39 in total

View Taxonomy