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L3_083_366G1_scaffold_1069

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_366G1_scaffold_1069_1
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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319..942
DNA (624bp) protein (208aa)
Alpha-amylase/pullulanase n=1 Tax=Prevotella copri CAG:164 RepID=R6BWD8_9BACT
Alpha-amylase/pullulanase {ECO:0000313|EMBL:CDA65359.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
L3_083_366G1_scaffold_1069_2
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1487..3472
DNA (1986bp) protein (662aa)
Helicase Snf2 family n=1 Tax=Prevotella copri CAG:164 RepID=R6C1M2_9BACT
Helicase Snf2 family {ECO:0000313|EMBL:CDA65361.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
SNF2-related protein
L3_083_366G1_scaffold_1069_3
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3472..3939
DNA (468bp) protein (156aa)
Helicase Snf2 family n=1 Tax=Prevotella sp. CAG:386 RepID=R6Q0Q7_9BACT
Helicase Snf2 family {ECO:0000313|EMBL:CDC26584.1}; TaxID=1262925 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:386.;"
SNF2-like protein
L3_083_366G1_scaffold_1069_4
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3943..4371
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PG60_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB34315.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
L3_083_366G1_scaffold_1069_5
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4565..5401
DNA (837bp) protein (279aa)
DNA-damage-inducible protein D n=1 Tax=Prevotella copri DSM 18205 RepID=D1PG58_9BACT
DNA-damage-inducible protein D {ECO:0000313|EMBL:EFB34314.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
L3_083_366G1_scaffold_1069_6
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5545..6618
DNA (1074bp) protein (358aa)
Ribosome-binding ATPase YchF n=1 Tax=Prevotella copri DSM 18205 RepID=D1PG57_9BACT
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
ychF; GTP-binding protein YchF
L3_083_366G1_scaffold_1069_7
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6615..6953
DNA (339bp) protein (113aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Prevotella copri CAG:164 RepID=R6C1M7_9BACT
prolipoprotein diacylglyceryl transferase
L3_083_366G1_scaffold_1069_8
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6950..7411
DNA (462bp) protein (154aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PG56_9BACT
L3_083_366G1_scaffold_1069_9
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7492..10155)
DNA (2664bp) protein (888aa)
DNA mismatch repair protein MutS n=3 Tax=root RepID=D1PG55_9BACT
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
mutS_1; DNA mismatch repair protein MutS
L3_083_366G1_scaffold_1069_10
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10200..11288)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PG54_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB34309.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
ATPase
L3_083_366G1_scaffold_1069_11
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11414..13270
DNA (1857bp) protein (619aa)
Uncharacterized protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BSX9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA67223.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_083_366G1_scaffold_1069_12
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13318..14808)
DNA (1491bp) protein (497aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
Cysteine--tRNA ligase n=3 Tax=root RepID=D1PG52_9BACT
cysteinyl-tRNA synthetase
L3_083_366G1_scaffold_1069_13
unknown

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14923..15018
DNA (96bp) protein (32aa)

This feature has no annotations

L3_083_366G1_scaffold_1069_14
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15160..16665
DNA (1506bp) protein (502aa)
Coenzyme A transferase PsecoA n=2 Tax=root RepID=R6C269_9BACT
Coenzyme A transferase PsecoA {ECO:0000313|EMBL:CDA67344.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
acetyl-CoA hydrolase
L3_083_366G1_scaffold_1069_15
Prevotella sp. CAG:604, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17319..17924)
DNA (606bp) protein (202aa)
RNA methylase SpoU family n=1 Tax=Prevotella sp. CAG:604 RepID=R6AX87_9BACT
RNA methylase SpoU family {ECO:0000313|EMBL:CDA53439.1}; TaxID=1262932 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:604.;"
TrmH family RNA methyltransferase
L3_083_366G1_scaffold_1069_16
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17964..18395)
DNA (432bp) protein (144aa)
Fe-S metabolism associated domain protein n=2 Tax=Prevotella RepID=D1PEB6_9BACT
Fe-S metabolism associated domain protein {ECO:0000313|EMBL:EFB34984.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
Fe-S metabolism associated SufE
L3_083_366G1_scaffold_1069_17
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18395..19630)
DNA (1236bp) protein (412aa)
Peptidase, U32 family {ECO:0000313|EMBL:EFB34983.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFB34983.1};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
prtC; collagenase (EC:3.4.-.-)
Peptidase, U32 family n=2 Tax=root RepID=D1PEB5_9BACT
L3_083_366G1_scaffold_1069_18
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19887..20837
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PEB4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB34982.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
L3_083_366G1_scaffold_1069_19
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20902..22002
DNA (1101bp) protein (367aa)
Putative cysteine peptidase n=1 Tax=Prevotella copri CAG:164 RepID=R6C7A5_9BACT
Putative cysteine peptidase {ECO:0000313|EMBL:CDA67301.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_083_366G1_scaffold_1069_20
unknown

Not on your lists

22467..22613
DNA (147bp) protein (49aa)

This feature has no annotations

L3_083_366G1_scaffold_1069_21
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22807..23052
DNA (246bp) protein (82aa)
Uncharacterized protein n=3 Tax=root RepID=R6C227_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA67299.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_083_366G1_scaffold_1069_22

Not on your lists

23043..23393
DNA (351bp) protein (117aa)
Uncharacterized protein n=3 Tax=root RepID=R6C227_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKC49711.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_083_366G1_scaffold_1069_23
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23396..24919
DNA (1524bp) protein (508aa)
RNA polymerase sigma-54 factor n=2 Tax=root RepID=D1PEB1_9BACT
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EFB34979.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
rpoN; RNA polymerase sigma-54 factor
L3_083_366G1_scaffold_1069_24
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25002..25541
DNA (540bp) protein (180aa)
Uncharacterized protein n=3 Tax=root RepID=D1PEB0_9BACT
PAP2 superfamily protein {ECO:0000313|EMBL:CDA67297.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_083_366G1_scaffold_1069_25
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25567..26073
DNA (507bp) protein (169aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=2 Tax=Prevotella RepID=D1PEA9_9BACT
phosphoribosylaminoimidazole carboxylase, PurE protein
L3_083_366G1_scaffold_1069_26
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26088..27995
DNA (1908bp) protein (636aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PEA8_9BACT
L3_083_366G1_scaffold_1069_27
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28263..28970
DNA (708bp) protein (236aa)
DNA-binding response regulator PrrA n=1 Tax=Prevotella copri CAG:164 RepID=R6C223_9BACT
DNA-binding response regulator PrrA {ECO:0000313|EMBL:CDA67294.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
DNA-binding response regulator
L3_083_366G1_scaffold_1069_28

Not on your lists

29040..29834
DNA (795bp) protein (265aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1SXE4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC51936.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_083_366G1_scaffold_1069_29
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30099..30713
DNA (615bp) protein (205aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
Putative sensor histidine kinase n=1 Tax=Prevotella copri CAG:164 RepID=R6CPY2_9BACT
sensor histidine kinase
L3_083_366G1_scaffold_1069_30
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30781..31593)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Prevotella copri CAG:164 RepID=R6C796_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA67291.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
Protein of unknown function (DUF3108)
Displaying items 1-30 of 55 in total

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