ggKbase home page

L3_083_366G1_scaffold_13

Search features with annotation key words

Displaying items 1-30 of 192 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_366G1_scaffold_13_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..985)
DNA (984bp) protein (328aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I8X4B0_BACFG
putative outer membrane protein involved in nutrient binding
Putative outer membrane protein involved in nutrient binding {ECO:0000313|EMBL:BAD48965.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_083_366G1_scaffold_13_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1047..4316)
DNA (3270bp) protein (1090aa)
Putative exported protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WN48_BACF6
hypothetical protein
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:EXZ53916.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L3_083_366G1_scaffold_13_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4653..5141
DNA (489bp) protein (163aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=Q64U62_BACFR
Uncharacterized protein {ECO:0000313|EMBL:EXZ28566.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
hypothetical protein
L3_083_366G1_scaffold_13_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5229..6491)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=Q64U61_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ28567.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
L3_083_366G1_scaffold_13_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6472..7773)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HVM6_BACFG
Histidine phosphatase super family protein {ECO:0000313|EMBL:EYA38899.1}; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
hypothetical protein
L3_083_366G1_scaffold_13_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7770..8600)
DNA (831bp) protein (277aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|SAAS:SAAS00089008};; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
3-deoxy-D-manno-octulosonate cytidylyltransferase n=14 Tax=Bacteroides RepID=C6I8A1_9BACE
putative lipopolysaccharide biosynthesis
L3_083_366G1_scaffold_13_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8765..8896
DNA (132bp) protein (44aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=I9GLZ3_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY96437.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_083_366G1_scaffold_13_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9458..9925
DNA (468bp) protein (156aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=Q64U56_BACFR
hypothetical protein
DNA-binding family protein {ECO:0000313|EMBL:EYA38902.1}; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
L3_083_366G1_scaffold_13_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10136..12469
DNA (2334bp) protein (778aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6I8A6_9BACE
Penicillin binding transpeptidase domain protein {ECO:0000313|EMBL:EXZ44713.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
putative penicillin-binding peptidoglycan biosynthesis-related exported protein
L3_083_366G1_scaffold_13_10
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12483..12851
DNA (369bp) protein (123aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=8 Tax=Bacteroides RepID=C6I8A7_9BACE
putative folic acid related biosynthesis protein (fragment)
Putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase {ECO:0000313|EMBL:EEZ27740.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L3_083_366G1_scaffold_13_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12914..14200
DNA (1287bp) protein (429aa)
Putative peptidase n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WN56_BACF6
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:EYA19232.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
putative peptidase
L3_083_366G1_scaffold_13_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14251..15411
DNA (1161bp) protein (387aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=E1WN57_BACF6
hypothetical protein
MORN repeat family protein {ECO:0000313|EMBL:EYA19233.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
L3_083_366G1_scaffold_13_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15492..16430)
DNA (939bp) protein (313aa)
Ribose-phosphate pyrophosphokinase n=5 Tax=Bacteroides RepID=C6I8B0_9BACE
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:EIY96443.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
prs; ribose-phosphate pyrophosphokinase
L3_083_366G1_scaffold_13_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16561..21036
DNA (4476bp) protein (1492aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I8X255_BACFG
putative two component system sensor histidine kinase
L3_083_366G1_scaffold_13_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21065..21793
DNA (729bp) protein (243aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=C6I8B2_9BACE
putative two component system response regulator
Response regulator {ECO:0000313|EMBL:EYE45107.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_083_366G1_scaffold_13_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21801..23237
DNA (1437bp) protein (479aa)
Putative efflux pump component protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64U48_BACFR
putative efflux pump component protein
C4-dicarboxylate anaerobic carrier family protein {ECO:0000313|EMBL:EXZ83328.1}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
L3_083_366G1_scaffold_13_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23851..24006
DNA (156bp) protein (52aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LQY5_9BACE
Transposase family protein {ECO:0000313|EMBL:EXZ53932.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L3_083_366G1_scaffold_13_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24006..24179
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I8X1U1_BACFG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY47355.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_083_366G1_scaffold_13_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24503..25240
DNA (738bp) protein (246aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=Q64U44_BACFR
hypothetical protein
TPR repeat family protein {ECO:0000313|EMBL:EYB10068.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_083_366G1_scaffold_13_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25358..26341
DNA (984bp) protein (328aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I8XBB3_BACFG
Chorismate binding enzyme family protein {ECO:0000313|EMBL:EXZ19198.1}; TaxID=1339271 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. J-143-4.;"
putative para-aminobenzoate synthase component I
L3_083_366G1_scaffold_13_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26325..26921
DNA (597bp) protein (199aa)
Uncharacterized protein n=5 Tax=Bacteroides fragilis RepID=E1WN64_BACF6
hypothetical protein
Aminotransferase class IV family protein {ECO:0000313|EMBL:EXZ73196.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
L3_083_366G1_scaffold_13_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27209..27877
DNA (669bp) protein (223aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=Q5LCY0_BACFN
hypothetical protein
TIGR02453 family domain protein {ECO:0000313|EMBL:EXZ44525.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
L3_083_366G1_scaffold_13_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27946..29958
DNA (2013bp) protein (671aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
1,4-alpha-glucan branching enzyme n=3 Tax=Bacteroides fragilis RepID=Q64U39_BACFR
1,4-alpha-glucan branching enzyme
L3_083_366G1_scaffold_13_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30034..31731)
DNA (1698bp) protein (566aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=I0PYS3_9BACE
putative amylase
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EYE49892.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_083_366G1_scaffold_13_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31742..32800)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I3HYJ0_BACFG
Oxidoreductase , NAD-binding Rossmann fold family protein {ECO:0000313|EMBL:EXZ28504.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
putative oxidoreductase
L3_083_366G1_scaffold_13_26
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32791..33591)
DNA (801bp) protein (267aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=E1WN69_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD40564.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_083_366G1_scaffold_13_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33767..34981)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I9ARY0_BACFG
Fosmidomycin resistance protein {ECO:0000313|EMBL:EYE49895.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
fsr; putative fosmidomycin resistance protein
L3_083_366G1_scaffold_13_28
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35200..36705
DNA (1506bp) protein (502aa)
Glutamate--ammonia ligase, catalytic domain protein {ECO:0000313|EMBL:EEZ27815.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EEZ27815.1};; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
Glutamine synthetase I n=2 Tax=Bacteroides RepID=Q64U33_BACFR
glutamine synthetase I
L3_083_366G1_scaffold_13_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36791..37372
DNA (582bp) protein (194aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=E1WN72_BACF6
putative DNA-binding hypothetical protein
Putative regulatory protein {ECO:0000313|EMBL:BAD48997.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_083_366G1_scaffold_13_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37444..38157
DNA (714bp) protein (238aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6I8C8_9BACE
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAD48998.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
Displaying items 1-30 of 192 in total

View Taxonomy