ggKbase home page

L3_083_366G1_scaffold_36

Search features with annotation key words

Displaying items 1-30 of 135 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_366G1_scaffold_36_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..77)
DNA (75bp) protein (25aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6ALM4_9PORP
integrase / site-specific recombinase
Integrase / site-specific recombinase {ECO:0000313|EMBL:ABR41914.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_083_366G1_scaffold_36_2
unknown

Not on your lists

320..436
DNA (117bp) protein (39aa)

This feature has no annotations

L3_083_366G1_scaffold_36_3
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

476..1018
DNA (543bp) protein (181aa)
Lipocalin-like protein n=7 Tax=Bacteroidales RepID=C7XF76_9PORP
Lipocalin-like protein {ECO:0000313|EMBL:EFK63710.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
sugar nucleotide epimerase
L3_083_366G1_scaffold_36_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1100..1522
DNA (423bp) protein (141aa)
Large-conductance mechanosensitive channel n=5 Tax=Bacteroidales RepID=C7XF75_9PORP
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
large conductance mechanosensitive channel protein
L3_083_366G1_scaffold_36_5
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1598..1819
DNA (222bp) protein (74aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=C7XF74_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU49521.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_083_366G1_scaffold_36_6
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1962..2798
DNA (837bp) protein (279aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=K6ALN1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ83451.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_366G1_scaffold_36_7
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2819..4534)
DNA (1716bp) protein (572aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Two-component sensor histidine kinase n=4 Tax=Bacteroidales RepID=D7IWW3_9BACE
two-component system sensor histidine kinase
L3_083_366G1_scaffold_36_8
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4661..6001)
DNA (1341bp) protein (447aa)
Sigma-54 dependent DNA-binding response regulator Nla6 n=4 Tax=Bacteroidales RepID=D7IWW2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN24649.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
two-component system response regulator
L3_083_366G1_scaffold_36_9
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6060..6791)
DNA (732bp) protein (244aa)
Transcription regulator n=5 Tax=Bacteroidales RepID=D7IWW1_9BACE
Transcription regulator {ECO:0000313|EMBL:EFI07114.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
transcriptional regulator
L3_083_366G1_scaffold_36_10
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6785..8077)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=K5ZCA1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ83447.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_366G1_scaffold_36_11
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8094..8888)
DNA (795bp) protein (265aa)
Cytochrome c biogenesis protein CcsA n=4 Tax=Bacteroidales RepID=D7IWV9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ83446.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
cytochrome c biogenesis protein CcsA
L3_083_366G1_scaffold_36_12
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8890..10080)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=K6ALL5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ83446.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_366G1_scaffold_36_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10083..11567)
DNA (1485bp) protein (495aa)
Cytochrome c-552 {ECO:0000256|HAMAP-Rule:MF_01182, ECO:0000256|SAAS:SAAS00233541}; EC=1.7.2.2 {ECO:0000256|HAMAP-Rule:MF_01182};; Ammonia-forming cytochrome c nitrite reductase {ECO:0000256|HAMAP-Rule:MF_01182}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
nrfA; cytochrome c552 (EC:1.7.2.2)
Cytochrome c-552 n=3 Tax=Bacteroidales RepID=D0TJX1_9BACE
L3_083_366G1_scaffold_36_14
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11586..12176)
DNA (591bp) protein (197aa)
Cytochrome c nitrate reductase, small subunit n=1 Tax=Parabacteroides sp. D13 RepID=C7XF65_9PORP
Cytochrome c nitrate reductase, small subunit {ECO:0000313|EMBL:KEJ83444.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
quinol oxidase
L3_083_366G1_scaffold_36_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12278..13111
DNA (834bp) protein (278aa)
OmpA family protein n=2 Tax=Parabacteroides RepID=C7XF64_9PORP
flagellar motor protein MotB
OmpA family protein {ECO:0000313|EMBL:KDS52373.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
L3_083_366G1_scaffold_36_16
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13173..13724)
DNA (552bp) protein (184aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=C7XF63_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EFI07107.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_083_366G1_scaffold_36_17
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13726..14271)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XF62_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU49509.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_083_366G1_scaffold_36_18
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14425..15648)
DNA (1224bp) protein (408aa)
L-fucose:H+ symporter permease n=3 Tax=Bacteroidales RepID=D7IWV2_9BACE
MFS transporter, FHS family, L-fucose permease {ECO:0000313|EMBL:KEJ83439.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
fucose permease
L3_083_366G1_scaffold_36_19
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15657..16007)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6B9B9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN24638.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_083_366G1_scaffold_36_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16051..16677)
DNA (627bp) protein (209aa)
ADP-ribose pyrophosphatase, MutT family protein n=7 Tax=Bacteroidales RepID=A6L883_PARD8
NUDIX domain protein {ECO:0000313|EMBL:KDS70130.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
ADP-ribose pyrophosphatase
L3_083_366G1_scaffold_36_21
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17052..17480
DNA (429bp) protein (143aa)
Small heat shock protein n=9 Tax=Bacteroidales RepID=A6L882_PARD8
small heat shock protein
Hsp20-like protein {ECO:0000313|EMBL:KEJ83436.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_083_366G1_scaffold_36_22
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17568..18050
DNA (483bp) protein (161aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Ferritin n=5 Tax=Bacteroidales RepID=C7XF56_9PORP
ferritin A
L3_083_366G1_scaffold_36_23
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18133..18867)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6L880_PARD8
Uncharacterized protein {ECO:0000313|EMBL:KEJ83434.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_366G1_scaffold_36_24
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18899..19792)
DNA (894bp) protein (298aa)
Glycine betaine-binding protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6L879_PARD8
glycine betaine-binding protein
Glycine betaine/proline transport system substrate-binding protein {ECO:0000313|EMBL:KEJ83433.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_083_366G1_scaffold_36_25
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19821..20654)
DNA (834bp) protein (278aa)
Glycine betaine/L-proline transport system permease n=4 Tax=Bacteroidales RepID=A6L878_PARD8
glycine betaine/L-proline transport system permease
Glycine betaine transport system permease protein opuAB {ECO:0000313|EMBL:EFK63687.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_083_366G1_scaffold_36_26
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20651..21877)
DNA (1227bp) protein (409aa)
Glycine betaine transport ATP-binding protein n=3 Tax=Parabacteroides RepID=A6L877_PARD8
Glycine betaine/proline transport system ATP-binding protein {ECO:0000313|EMBL:KEJ83431.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
glycine betaine transport ATP-binding protein
L3_083_366G1_scaffold_36_27
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22048..23916)
DNA (1869bp) protein (623aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6ALK0_9PORP
two-component system sensor histidine kinase
L3_083_366G1_scaffold_36_28
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24090..24722
DNA (633bp) protein (211aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EEU49498.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EEU49498.1};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Thioredoxin peroxidase n=9 Tax=Bacteroidales RepID=A6L875_PARD8
thioredoxin peroxidase
L3_083_366G1_scaffold_36_29
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24894..26189
DNA (1296bp) protein (432aa)
Uncharacterized protein n=2 Tax=Parabacteroides distasonis RepID=A6L873_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKN24462.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
L3_083_366G1_scaffold_36_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26266..26979)
DNA (714bp) protein (238aa)
Uncharacterized protein n=2 Tax=Parabacteroides distasonis RepID=A6L872_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKN24461.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
Displaying items 1-30 of 135 in total

View Taxonomy