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L3_083_366G1_scaffold_112

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Displaying items 1-30 of 122 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_366G1_scaffold_112_1
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..526
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AEB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83995.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
transposase IS4
L3_083_366G1_scaffold_112_2
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

784..1401
DNA (618bp) protein (206aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
LexA repressor (EC:3.4.21.88)
LexA repressor n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EKN0_9FIRM
L3_083_366G1_scaffold_112_3
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1457..2083)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6XE72_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04642.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_083_366G1_scaffold_112_4
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2143..2811)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WKJ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04636.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-)
L3_083_366G1_scaffold_112_5
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2867..3625)
DNA (759bp) protein (253aa)
Amino acid/amide ABC transporter ATP-binding protein 1 HAAT family (TC 3.A.1.4.-) n=2 Tax=root RepID=R6W590_9CLOT
Amino acid/amide ABC transporter ATP-binding protein 1 HAAT family (TC 3.A.1.4.-) {ECO:0000313|EMBL:CDD04635.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-)
L3_083_366G1_scaffold_112_6
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3628..4704)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6XE63_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04632.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
inner-membrane translocator
L3_083_366G1_scaffold_112_7
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4726..5625)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W583_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04625.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
inner-membrane translocator
L3_083_366G1_scaffold_112_8
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(5774..6991)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6FEF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB00442.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-)
L3_083_366G1_scaffold_112_9
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

7275..7484
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EKL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB00440.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L3_083_366G1_scaffold_112_10
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7481..7834)
DNA (354bp) protein (118aa)
Ribosomal silencing factor RsfS n=1 Tax=Clostridium sp. CAG:91 RepID=R6W0L8_9CLOT
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_083_366G1_scaffold_112_11
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7842..8402)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6XE23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04582.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
conserved hypothetical protein TIGR00488
L3_083_366G1_scaffold_112_12
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8428..9042)
DNA (615bp) protein (205aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase NadD (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Clostridium sp. CAG:91 RepID=R6W545_9CLOT
L3_083_366G1_scaffold_112_13
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(9107..9397)
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6ETI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB00434.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L3_083_366G1_scaffold_112_14
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9422..10714)
DNA (1293bp) protein (431aa)
GTPase Obg n=1 Tax=Clostridium sp. CAG:91 RepID=R6W0K5_9CLOT
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Obg family GTPase CgtA
L3_083_366G1_scaffold_112_15
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10800..11084)
DNA (285bp) protein (95aa)
50S ribosomal protein L27 n=2 Tax=Firmicutes RepID=R6EUH4_9FIRM
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
LSU ribosomal protein L27P
L3_083_366G1_scaffold_112_16
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11088..11435)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WKD2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04561.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L3_083_366G1_scaffold_112_17
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists


comp(11441..11746)
DNA (306bp) protein (102aa)
50S ribosomal protein L21 n=3 Tax=root RepID=R6ETH8_9FIRM
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
LSU ribosomal protein L21P
L3_083_366G1_scaffold_112_18
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11907..12635)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6XDZ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04552.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_083_366G1_scaffold_112_19
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12662..13549)
DNA (888bp) protein (296aa)
L-serine dehydratase alpha chain n=1 Tax=Clostridium sp. CAG:91 RepID=R6WCL2_9CLOT
L-serine dehydratase alpha chain {ECO:0000313|EMBL:CDD04549.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L-serine dehydratase, iron-sulfur-dependent, alpha subunit
L3_083_366G1_scaffold_112_20
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13552..14214)
DNA (663bp) protein (221aa)
sdhB; L-serine dehydratase iron-sulfur-dependent beta subunit SdhB (EC:4.3.1.17)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W0I3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04543.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L3_083_366G1_scaffold_112_21
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14253..15167)
DNA (915bp) protein (305aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.12 5.4.99.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W0I0_9CLOT
L3_083_366G1_scaffold_112_22
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15167..15673)
DNA (507bp) protein (169aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
lspA; signal peptidase II LspA (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Clostridium sp. CAG:91 RepID=R6W502_9CLOT
L3_083_366G1_scaffold_112_23
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15699..16808)
DNA (1110bp) protein (370aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Clostridium sp. CAG:91 RepID=R6XDX9_9CLOT
L3_083_366G1_scaffold_112_24
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16935..17471)
DNA (537bp) protein (179aa)
Cell division protein SepF n=1 Tax=Clostridium sp. CAG:91 RepID=R6W4Z8_9CLOT
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
cell division protein sepF
L3_083_366G1_scaffold_112_25
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17505..18227)
DNA (723bp) protein (241aa)
Pyridoxal phosphate enzyme YggS family n=1 Tax=Clostridium sp. CAG:91 RepID=R6W0G1_9CLOT
Pyridoxal phosphate enzyme YggS family {ECO:0000313|EMBL:CDD04513.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
pyridoxal phosphate enzyme, YggS family
L3_083_366G1_scaffold_112_26
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18245..19813)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WK85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04506.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_083_366G1_scaffold_112_27
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19903..20322)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W0F2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04503.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_083_366G1_scaffold_112_28
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20411..21361)
DNA (951bp) protein (317aa)
dacA2; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=2 Tax=root RepID=R6W4X0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04500.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L3_083_366G1_scaffold_112_29
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21384..21788)
DNA (405bp) protein (135aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=1 Tax=Clostridium sp. CAG:91 RepID=R6WK69_9CLOT
L3_083_366G1_scaffold_112_30
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21823..22929)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WCC5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04489.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
rodA1; rod shape-determining protein RodA1
Displaying items 1-30 of 122 in total

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