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L3_083_366G1_scaffold_144

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_366G1_scaffold_144_1
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(103..666)
DNA (564bp) protein (188aa)
pgsA; CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase PgsA (EC:2.7.8.5)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Clostridium sp. CAG:91 RepID=R6VYB3_9CLOT
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:CDC99479.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L3_083_366G1_scaffold_144_2
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(659..1987)
DNA (1329bp) protein (443aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
SSU ribosomal protein S12P methylthiotransferase (EC:1.3.1.74 2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=2 Tax=root RepID=R6EYN3_9FIRM
L3_083_366G1_scaffold_144_3

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comp(1993..2232)
DNA (240bp) protein (80aa)
DNA-directed RNA polymerase subunit omega n=3 Tax=root RepID=R6FIK0_9FIRM
DNA-directed RNA polymerase, omega subunit {ECO:0000313|EMBL:EKC67097.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
DNA-directed RNA polymerase subunit omega
L3_083_366G1_scaffold_144_4
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2234..2869)
DNA (636bp) protein (212aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=2 Tax=root RepID=R6WA32_9CLOT
L3_083_366G1_scaffold_144_5
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2859..3137)
DNA (279bp) protein (93aa)
UPF0296 protein BN808_01393 n=1 Tax=Clostridium sp. CAG:91 RepID=R6VQT5_9CLOT
UPF0296 protein BN808_01393 {ECO:0000256|HAMAP-Rule:MF_01503}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_083_366G1_scaffold_144_6
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(3155..4033)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ECI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97560.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L3_083_366G1_scaffold_144_7
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4140..5318)
DNA (1179bp) protein (393aa)
Rhodanese-like protein n=2 Tax=root RepID=R6VVS3_9CLOT
Rhodanese-like protein {ECO:0000313|EMBL:CDD01080.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
rhodanese domain-containing protein
L3_083_366G1_scaffold_144_8
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

5441..5773
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6FA35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA98927.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L3_083_366G1_scaffold_144_9
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(5777..6463)
DNA (687bp) protein (229aa)
HAD hydrolase family IA variant 3 n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EQ23_9FIRM
HAD hydrolase family IA variant 3 {ECO:0000313|EMBL:CDA98926.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
HAD superfamily hydrolase
L3_083_366G1_scaffold_144_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6519..9608)
DNA (3090bp) protein (1030aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XRX6_9CLOT
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
L3_083_366G1_scaffold_144_11
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9693..10559)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6C314_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA67579.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
L3_083_366G1_scaffold_144_12
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10631..11878)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. NC2007 RepID=UPI0003B4099F
Uncharacterized protein {ECO:0000313|EMBL:CDE22175.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
hypothetical protein
L3_083_366G1_scaffold_144_13
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12220..12855)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VWD7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01395.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_083_366G1_scaffold_144_14
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12848..15910)
DNA (3063bp) protein (1021aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WB24_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01396.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Cation/multidrug efflux pump
L3_083_366G1_scaffold_144_15
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15924..17351)
DNA (1428bp) protein (476aa)
Efflux transporter RND family MFP subunit n=1 Tax=Clostridium sp. CAG:91 RepID=R6X4K3_9CLOT
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDD01397.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_083_366G1_scaffold_144_16
unknown

Not on your lists

comp(17454..17552)
DNA (99bp) protein (33aa)

This feature has no annotations

L3_083_366G1_scaffold_144_17
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17552..18169)
DNA (618bp) protein (206aa)
Uncharacterized protein n=2 Tax=root RepID=R6VW53_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD02938.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
RNA polymerase sigma factor sigma-70 family protein
L3_083_366G1_scaffold_144_18
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18197..18940)
DNA (744bp) protein (248aa)
rRNA methylase, putative, group 3 (EC:2.1.1.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6X999_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD02937.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L3_083_366G1_scaffold_144_19
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19017..19457)
DNA (441bp) protein (147aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Mini-ribonuclease 3 n=1 Tax=Clostridium sp. CAG:91 RepID=R6WFI6_9CLOT
hypothetical protein
L3_083_366G1_scaffold_144_20
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(19442..20857)
DNA (1416bp) protein (472aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6F6G6_9FIRM
L3_083_366G1_scaffold_144_21
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(20854..21579)
DNA (726bp) protein (242aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EAN0_9FIRM
L3_083_366G1_scaffold_144_22
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(21970..22323)
DNA (354bp) protein (118aa)
Penicillinase repressor n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ELH2_9FIRM
Penicillinase repressor {ECO:0000313|EMBL:CDA97576.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
transcriptional regulator
L3_083_366G1_scaffold_144_23
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(22491..23063)
DNA (573bp) protein (191aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6F6G9_9FIRM
L3_083_366G1_scaffold_144_24
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(23182..24789)
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EAN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97578.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L3_083_366G1_scaffold_144_25
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

comp(24900..26627)
DNA (1728bp) protein (576aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BKL6_9FIRM
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:CDD66279.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
RNA helicase DEAD/DEAH box family protein
L3_083_366G1_scaffold_144_26
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

26917..28032
DNA (1116bp) protein (372aa)
4Fe-4S binding domain protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EV94_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDB01019.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L3_083_366G1_scaffold_144_27
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(28739..29395)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EM70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01020.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L3_083_366G1_scaffold_144_28
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(29426..29656)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EW95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01021.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L3_083_366G1_scaffold_144_29
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(29687..30301)
DNA (615bp) protein (205aa)
Peptidase M56 family n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6FG82_9FIRM
Peptidase M56 family {ECO:0000313|EMBL:CDB01022.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L3_083_366G1_scaffold_144_30

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comp(30584..31192)
DNA (609bp) protein (203aa)
Accessory gene regulator B {ECO:0000313|EMBL:EKC74078.1}; EC=3.4.-.- {ECO:0000313|EMBL:EKC74078.1};; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Accessory gene regulator B (Fragment) n=1 Tax=human gut metagenome RepID=K1TW70_9ZZZZ
Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide
Displaying items 1-30 of 82 in total

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