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L3_083_366G1_scaffold_516

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_366G1_scaffold_516_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..142
DNA (141bp) protein (47aa)
Site-specific recombinase, phage integrase family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZEI4_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFQ08418.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Phage integrase family.
L3_083_366G1_scaffold_516_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(502..1377)
DNA (876bp) protein (292aa)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EEU98279.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EEU98279.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1R9_9FIRM
L3_083_366G1_scaffold_516_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1381..2064)
DNA (684bp) protein (228aa)
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine ammonia-lyase {ECO:0000313|EMBL:CBK99381.1}; EC=4.3.1.17 {ECO:0000313|EMBL:CBK99381.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L-serine ammonia-lyase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZD2_9FIRM
L3_083_366G1_scaffold_516_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2231..3526
DNA (1296bp) protein (432aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Trigger factor n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZD3_9FIRM
trigger factor
L3_083_366G1_scaffold_516_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3726..4550
DNA (825bp) protein (275aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZD4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99383.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_366G1_scaffold_516_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4663..4989)
DNA (327bp) protein (109aa)
Transcriptional regulator, MarR family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZD5_9FIRM
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CBK99384.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_366G1_scaffold_516_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5167..7425)
DNA (2259bp) protein (753aa)
Ferrous iron transporter FeoB n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZD6_9FIRM
Ferrous iron transporter FeoB {ECO:0000313|EMBL:CBK99385.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
ferrous iron transporter FeoB
L3_083_366G1_scaffold_516_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7634..8659)
DNA (1026bp) protein (342aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-galactose 4-epimerase {ECO:0000313|EMBL:CBK99386.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CBK99386.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
UDP-galactose 4-epimerase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZD7_9FIRM
L3_083_366G1_scaffold_516_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8911..9984)
DNA (1074bp) protein (358aa)
Galactose mutarotase and related enzymes (EC:5.1.3.3)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096, ECO:0000313|EMBL:CBK99387.1};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Aldose 1-epimerase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZD8_9FIRM
L3_083_366G1_scaffold_516_10
unknown

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comp(10399..10947)
DNA (549bp) protein (183aa)

This feature has no annotations

L3_083_366G1_scaffold_516_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11315..15250)
DNA (3936bp) protein (1312aa)
Cation/multidrug efflux pump n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZD9_9FIRM
Cation/multidrug efflux pump
Cation/multidrug efflux pump {ECO:0000313|EMBL:CBK99388.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_366G1_scaffold_516_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15605..16546
DNA (942bp) protein (314aa)
Uncharacterized homolog of PSP1 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZE0_9FIRM
Uncharacterized homolog of PSP1
Uncharacterized homolog of PSP1 {ECO:0000313|EMBL:CBK99389.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_366G1_scaffold_516_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17141..17821
DNA (681bp) protein (227aa)
Predicted O-methyltransferase n=2 Tax=root RepID=D4JZE2_9FIRM
Predicted O-methyltransferase
Predicted O-methyltransferase {ECO:0000313|EMBL:CBK99391.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_366G1_scaffold_516_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17842..18693
DNA (852bp) protein (284aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZE3_9FIRM
conserved hypothetical protein TIGR00096
L3_083_366G1_scaffold_516_15
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18717..19208
DNA (492bp) protein (164aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Phosphodiesterase MJ0936 family n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R398_9FIRM
hypothetical protein
L3_083_366G1_scaffold_516_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19205..19972
DNA (768bp) protein (256aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
BirA, biotin-[acetyl-CoA-carboxylase] ligase region {ECO:0000313|EMBL:CBK99393.1}; EC=6.3.4.15 {ECO:0000313|EMBL:CBK99393.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
BirA, biotin-[acetyl-CoA-carboxylase] ligase region n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZE4_9FIRM
L3_083_366G1_scaffold_516_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20548..21189
DNA (642bp) protein (214aa)
Rhomboid family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZE5_9FIRM
Rhomboid family.
Rhomboid family {ECO:0000313|EMBL:CBK99394.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_366G1_scaffold_516_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21197..22156
DNA (960bp) protein (320aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZE6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99395.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_366G1_scaffold_516_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22206..23495)
DNA (1290bp) protein (430aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CBK99396.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CBK99396.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZE7_9FIRM
L3_083_366G1_scaffold_516_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23523..24482)
DNA (960bp) protein (320aa)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZE8_9FIRM
D-alanyl-D-alanine carboxypeptidase
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CBK99397.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_366G1_scaffold_516_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24588..25112
DNA (525bp) protein (175aa)
Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZE9_9FIRM
Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily {ECO:0000313|EMBL:CBK99398.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_366G1_scaffold_516_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25318..26892)
DNA (1575bp) protein (525aa)
Magnesium transporter n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGA2_9FIRM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Mg2+ transporter (mgtE)
L3_083_366G1_scaffold_516_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27859..31404)
DNA (3546bp) protein (1182aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159, ECO:0000313|EMBL:CBK99399.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZF0_9FIRM
L3_083_366G1_scaffold_516_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31874..32425
DNA (552bp) protein (184aa)
NTP pyrophosphohydrolases including oxidative damage repair enzymes (EC:3.6.1.13)
NTP pyrophosphohydrolases including oxidative damage repair enzymes {ECO:0000313|EMBL:CBK99400.1}; EC=3.6.1.13 {ECO:0000313|EMBL:CBK99400.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
NTP pyrophosphohydrolases including oxidative damage repair enzymes n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZF1_9FIRM
L3_083_366G1_scaffold_516_25
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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32422..33147
DNA (726bp) protein (242aa)
Pseudouridine synthase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QYU1_9FIRM
Pseudouridine synthase {ECO:0000313|EMBL:CDC27172.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
pseudouridine synthase
L3_083_366G1_scaffold_516_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33131..33802
DNA (672bp) protein (224aa)
Transcriptional regulators n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZF2_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBK99401.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_366G1_scaffold_516_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33863..34447)
DNA (585bp) protein (195aa)
Putative manganese efflux pump MntP n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZF3_9FIRM
Predicted membrane protein
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_366G1_scaffold_516_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(34828..37407)
DNA (2580bp) protein (860aa)
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897, ECO:0000313|EMBL:CBK99403.1}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897, ECO:0000313|EMBL:CBK99403.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
DNA gyrase subunit A n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZF4_9FIRM
L3_083_366G1_scaffold_516_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37420..39414)
DNA (1995bp) protein (665aa)
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
DNA gyrase subunit B n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZF5_9FIRM
L3_083_366G1_scaffold_516_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39485..39739)
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZF6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99405.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Displaying items 1-30 of 41 in total

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