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L3_083_366G1_scaffold_551

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_366G1_scaffold_551_1
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(244..690)
DNA (447bp) protein (149aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
3-dehydroquinate dehydratase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFS1_9CLOT
3-dehydroquinate dehydratase
L3_083_366G1_scaffold_551_2
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(809..1678)
DNA (870bp) protein (290aa)
aroE3; shikimate dehydrogenase AroE (EC:1.1.1.25)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Shikimate dehydrogenase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MQK4_CLOSA
L3_083_366G1_scaffold_551_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2023..2208)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEL7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY26439.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_083_366G1_scaffold_551_4
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2549..3910
DNA (1362bp) protein (454aa)
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEN5_9CLOT
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein {ECO:0000313|EMBL:EKY26438.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
sodium:dicarboxylate symporter family protein
L3_083_366G1_scaffold_551_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4013..4570
DNA (558bp) protein (186aa)
Adenylate cyclase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEL3_9CLOT
Adenylate cyclase {ECO:0000313|EMBL:EKY26434.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
adenylate cyclase
L3_083_366G1_scaffold_551_6
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4667..5662)
DNA (996bp) protein (332aa)
Polysaccharide deacetylase family protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KVZ0_9CLOT
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:CDB74076.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
polysaccharide deacetylase
L3_083_366G1_scaffold_551_7
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6164..8092)
DNA (1929bp) protein (643aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEN0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY26433.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_083_366G1_scaffold_551_8
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8313..9200)
DNA (888bp) protein (296aa)
Prephenate dehydrogenase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFR2_9CLOT
Prephenate dehydrogenase {ECO:0000313|EMBL:EKY26432.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
prephenate dehydrogenase
L3_083_366G1_scaffold_551_9
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9342..10355)
DNA (1014bp) protein (338aa)
aroF; phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QES0_9CLOT
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EKY26431.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_083_366G1_scaffold_551_10
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10499..10993)
DNA (495bp) protein (165aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
Shikimate kinase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FXX6_9CLOT
shikimate kinase
L3_083_366G1_scaffold_551_11
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11016..11831)
DNA (816bp) protein (272aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
aroE1; shikimate dehydrogenase AroE (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEK7_9CLOT
L3_083_366G1_scaffold_551_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12023..13180)
DNA (1158bp) protein (386aa)
pheA: P-protein (EC:5.4.99.5 4.2.1.51)
Chorismate mutase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEM5_9CLOT
Chorismate mutase {ECO:0000313|EMBL:EKY26428.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_083_366G1_scaffold_551_13
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13389..14465)
DNA (1077bp) protein (359aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
aroC; chorismate synthase AroC (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FYS9_9CLOT
L3_083_366G1_scaffold_551_14
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14443..15738)
DNA (1296bp) protein (432aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240549}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240533};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFG9_9CLOT
3-phosphoshikimate 1-carboxyvinyltransferase
L3_083_366G1_scaffold_551_15
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15962..17008)
DNA (1047bp) protein (349aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EIP4_9CLOT
L3_083_366G1_scaffold_551_16
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17227..18240)
DNA (1014bp) protein (338aa)
aroF1; phospho-2-dehydro-3-deoxyheptonate aldolase AroF (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FLM8_9CLOT
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:CDB14183.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
L3_083_366G1_scaffold_551_17
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18478..18609)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QER0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY26421.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_083_366G1_scaffold_551_18
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18720..20153)
DNA (1434bp) protein (478aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
cls1; cardiolipin synthase Cls (EC:2.7.8.-)
Cardiolipin synthase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFG5_9CLOT
L3_083_366G1_scaffold_551_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20365..20913)
DNA (549bp) protein (183aa)
Rubredoxin/rubrerythrin n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SV42_CLOPS
rubredoxin/rubrerythrin
Rubredoxin/rubrerythrin {ECO:0000313|EMBL:ABG86148.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_083_366G1_scaffold_551_20
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21298..23595)
DNA (2298bp) protein (766aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
Histidine kinase A domain protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FQ47_9CLOT
sensor histidine kinase
L3_083_366G1_scaffold_551_21
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23570..24277)
DNA (708bp) protein (236aa)
Response regulator receiver domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q9K0_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EKY24400.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
two-component system response regulator
L3_083_366G1_scaffold_551_22
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24460..25668)
DNA (1209bp) protein (403aa)
Nucleoside transporter, NupC family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q920_9CLOT
Nucleoside permease {ECO:0000256|RuleBase:RU362018}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
nucleoside transporter NupC
L3_083_366G1_scaffold_551_23
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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25880..26776
DNA (897bp) protein (299aa)
Transposase n=6 Tax=Bacteroides RepID=D7JBX1_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEB22561.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
ISSru4, transposase
L3_083_366G1_scaffold_551_24
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


27530..29980
DNA (2451bp) protein (817aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
leuS; leucine--tRNA ligase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q8V8_9CLOT
L3_083_366G1_scaffold_551_25
unknown

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comp(30014..30400)
DNA (387bp) protein (129aa)

This feature has no annotations

L3_083_366G1_scaffold_551_26
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30593..31339)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q9K8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY24410.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ribosomal RNA adenine dimethylase family protein
L3_083_366G1_scaffold_551_27
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31690..32022
DNA (333bp) protein (111aa)
HesB-like selenoprotein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q930_9CLOT
HesB-like selenoprotein {ECO:0000313|EMBL:EKY24411.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
HesB-like selenofamily protein
L3_083_366G1_scaffold_551_28
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32071..32727)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q9Y3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY24412.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_083_366G1_scaffold_551_29
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32851..33645)
DNA (795bp) protein (265aa)
Putative RelA/SpoT domain protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EXR2_9CLOT
Putative RelA/SpoT domain protein {ECO:0000313|EMBL:CDG01031.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L3_083_366G1_scaffold_551_30
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33737..34429)
DNA (693bp) protein (231aa)
Ser/Thr phosphatase family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q9L1_9CLOT
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EKY24415.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
phoshohydrolase
Displaying items 1-30 of 41 in total

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