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L3_083_366G1_scaffold_667

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Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_366G1_scaffold_667_1
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(140..778)
DNA (639bp) protein (213aa)
Putative DNA-binding protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PAF9_9BACT
Putative DNA-binding protein {ECO:0000313|EMBL:EFB36295.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
L3_083_366G1_scaffold_667_2
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1232..2545
DNA (1314bp) protein (438aa)
Exonuclease SbcCD, D subunit n=2 Tax=root RepID=D1PAG0_9BACT
Exonuclease SbcCD, D subunit {ECO:0000313|EMBL:EFB36296.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
exonuclease
L3_083_366G1_scaffold_667_3
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2542..5997
DNA (3456bp) protein (1152aa)
Putative exonuclease SbcC n=1 Tax=Prevotella copri CAG:164 RepID=R6BWP5_9BACT
Putative exonuclease SbcC {ECO:0000313|EMBL:CDA65459.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
SMC domain-containing protein
L3_083_366G1_scaffold_667_4
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6171..6515)
DNA (345bp) protein (115aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
panD; aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PAG6_9BACT
L3_083_366G1_scaffold_667_5
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6576..7427)
DNA (852bp) protein (284aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase n=2 Tax=root RepID=R6C1Y3_9BACT
L3_083_366G1_scaffold_667_6
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7601..8413
DNA (813bp) protein (271aa)
Starch synthase catalytic domain protein n=2 Tax=root RepID=D1PAG8_9BACT
Starch synthase catalytic domain protein {ECO:0000313|EMBL:EFB36304.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
glycogen synthase
L3_083_366G1_scaffold_667_7
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8449..9906
DNA (1458bp) protein (486aa)
Putative lipoprotein n=1 Tax=Prevotella copri CAG:164 RepID=R6BMU6_9BACT
Putative lipoprotein {ECO:0000313|EMBL:CDA65463.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_083_366G1_scaffold_667_8
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9942..10088
DNA (147bp) protein (49aa)
Putative dehydrogenase/oxidoreductase n=1 Tax=Prevotella copri CAG:164 RepID=R6BWQ2_9BACT
Putative dehydrogenase/oxidoreductase {ECO:0000313|EMBL:CDA65464.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_083_366G1_scaffold_667_9
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10511..10702
DNA (192bp) protein (64aa)
Uncharacterized protein n=2 Tax=Prevotella RepID=D1PAH2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA65465.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
L3_083_366G1_scaffold_667_10
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10734..13280)
DNA (2547bp) protein (849aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
UvrD/REP helicase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PAH3_9BACT
putative ATP-dependent helicase PcrA
L3_083_366G1_scaffold_667_11
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13317..14051)
DNA (735bp) protein (245aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Prevotella copri CAG:164 RepID=R6BMV1_9BACT
monofunctional biosynthetic peptidoglycan transglycosylase
L3_083_366G1_scaffold_667_12
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14088..14834)
DNA (747bp) protein (249aa)
OmpA family protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PAH5_9BACT
OmpA family protein {ECO:0000313|EMBL:EFB36311.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
OmpA family protein
L3_083_366G1_scaffold_667_13
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


15064..16545
DNA (1482bp) protein (494aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
proS; proline--tRNA ligase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PAH7_9BACT
L3_083_366G1_scaffold_667_14
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16593..17015
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Prevotella copri CAG:164 RepID=R6C1Z3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA65471.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
L3_083_366G1_scaffold_667_15
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17172..17564
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PAH9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB36315.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
L3_083_366G1_scaffold_667_16
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17620..18546)
DNA (927bp) protein (309aa)
AraC/XylS family transcriptional regulator n=1 Tax=Prevotella copri CAG:164 RepID=R6BMV5_9BACT
AraC/XylS family transcriptional regulator {ECO:0000313|EMBL:CDA65473.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
transcriptional regulator, AraC family
L3_083_366G1_scaffold_667_17
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18593..20287)
DNA (1695bp) protein (565aa)
Putative MFS transporter n=1 Tax=Prevotella copri CAG:164 RepID=R6BWR5_9BACT
Putative MFS transporter {ECO:0000313|EMBL:CDA65474.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
MFS transporter
L3_083_366G1_scaffold_667_18
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(20317..21099)
DNA (783bp) protein (261aa)
Auxiliary transport protein, membrane fusion protein (MFP) family protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PAI2_9BACT
Auxiliary transport protein, membrane fusion protein (MFP) family protein {ECO:0000313|EMBL:EFB36318.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
Multidrug resistance efflux pump
L3_083_366G1_scaffold_667_19
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21458..22786)
DNA (1329bp) protein (443aa)
Outer membrane efflux protein n=2 Tax=root RepID=R6C1Z7_9BACT
Outer membrane efflux protein {ECO:0000313|EMBL:CDA65476.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
outer membrane efflux protein
L3_083_366G1_scaffold_667_20
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22992..24431)
DNA (1440bp) protein (480aa)
Amidophosphoribosyltransferase {ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|PIRNR:PIRNR000485}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
Amidophosphoribosyltransferase n=1 Tax=Prevotella copri CAG:164 RepID=R6BWS3_9BACT
amidophosphoribosyltransferase
L3_083_366G1_scaffold_667_21
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24640..26391)
DNA (1752bp) protein (584aa)
Phosphoglucomutase n=2 Tax=root RepID=R6BQG4_9BACT
Phosphoglucomutase {ECO:0000313|EMBL:CDA65480.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
phosphoglucomutase/phosphomannomutase family protein
L3_083_366G1_scaffold_667_22
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26635..26955
DNA (321bp) protein (107aa)
Putative membrane protein n=1 Tax=Prevotella copri CAG:164 RepID=R6C201_9BACT
Putative membrane protein {ECO:0000313|EMBL:CDA65481.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_083_366G1_scaffold_667_23
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27035..27505
DNA (471bp) protein (157aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Prevotella copri CAG:164 RepID=R6CJK9_9BACT
hypothetical protein
L3_083_366G1_scaffold_667_24
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27605..30502
DNA (2898bp) protein (966aa)
uvrA_1; excinuclease ABC, A subunit (EC:3.1.25.-)
Excinuclease ABC subunit A n=1 Tax=Prevotella copri CAG:164 RepID=R6BMW5_9BACT
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
L3_083_366G1_scaffold_667_25
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30767..30904)
DNA (138bp) protein (46aa)
Helix-turn-helix protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BWT0_9BACT
Helix-turn-helix protein {ECO:0000313|EMBL:CDA65484.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
L3_083_366G1_scaffold_667_26
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31081..33129
DNA (2049bp) protein (683aa)
VirE protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BQG8_9BACT
VirE protein {ECO:0000313|EMBL:CDA65485.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_083_366G1_scaffold_667_27
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33416..33625
DNA (210bp) protein (70aa)
Uncharacterized protein n=2 Tax=Prevotella RepID=D1PAJ8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA66686.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_083_366G1_scaffold_667_28

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comp(33825..34427)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1R2W3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC43597.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
acetyltransferase
L3_083_366G1_scaffold_667_29
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34429..34590)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PHQ0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB33800.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
L3_083_366G1_scaffold_667_30
unknown

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comp(34809..35228)
DNA (420bp) protein (140aa)

This feature has no annotations

Displaying items 1-30 of 47 in total

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