ggKbase home page

L3_083_366G1_scaffold_744

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_366G1_scaffold_744_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(231..806)
DNA (576bp) protein (192aa)
Uridine kinase (EC:2.7.1.48)
Uridine kinase {ECO:0000313|EMBL:CBK99995.1}; EC=2.7.1.48 {ECO:0000313|EMBL:CBK99995.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Uridine kinase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K146_9FIRM
L3_083_366G1_scaffold_744_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1175..1753
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K147_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99996.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_366G1_scaffold_744_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2250..2465
DNA (216bp) protein (72aa)
Fe2+ transport system protein A n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K148_9FIRM
Fe2+ transport system protein A
Fe2+ transport system protein A {ECO:0000313|EMBL:CBK99997.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_366G1_scaffold_744_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2546..2767
DNA (222bp) protein (74aa)
Fe2+ transport system protein A n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K149_9FIRM
Fe2+ transport system protein A
Fe2+ transport system protein A {ECO:0000313|EMBL:CBK99998.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_366G1_scaffold_744_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2793..4985
DNA (2193bp) protein (731aa)
Ferrous iron transporter FeoB n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K150_9FIRM
Ferrous iron transporter FeoB {ECO:0000313|EMBL:CBK99999.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
ferrous iron transporter FeoB
L3_083_366G1_scaffold_744_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5021..5197
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K151_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00000.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_366G1_scaffold_744_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5298..5693
DNA (396bp) protein (132aa)
Mn-dependent transcriptional regulator n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K152_9FIRM
Mn-dependent transcriptional regulator
Mn-dependent transcriptional regulator {ECO:0000313|EMBL:CBL00001.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_366G1_scaffold_744_8
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5754..7019)
DNA (1266bp) protein (422aa)
GTPase HflX n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QCK0_9FIRM
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
GTPases
L3_083_366G1_scaffold_744_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7035..7643)
DNA (609bp) protein (203aa)
Acetyltransferases, including N-acetylases of ribosomal proteins n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K154_9FIRM
Acetyltransferases, including N-acetylases of ribosomal proteins
Acetyltransferases, including N-acetylases of ribosomal proteins {ECO:0000313|EMBL:CBL00003.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_366G1_scaffold_744_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7813..8145)
DNA (333bp) protein (111aa)
Plasmid stabilization system protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K155_9FIRM
Plasmid stabilization system protein
Plasmid stabilization system protein {ECO:0000313|EMBL:CBL00004.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_366G1_scaffold_744_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8142..8408)
DNA (267bp) protein (89aa)
Prevent-host-death family protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K156_9FIRM
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:CBL00005.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_366G1_scaffold_744_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8491..10284
DNA (1794bp) protein (598aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Methionine synthase I (cobalamin-dependent), methyltransferase domain (EC:2.1.1.13)
Methylenetetrahydrofolate reductase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K157_9FIRM
L3_083_366G1_scaffold_744_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10415..11944
DNA (1530bp) protein (510aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K158_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00007.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_366G1_scaffold_744_14
unknown

Not on your lists

11945..12094
DNA (150bp) protein (50aa)

This feature has no annotations

L3_083_366G1_scaffold_744_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12541..15246
DNA (2706bp) protein (902aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K159_9FIRM
L3_083_366G1_scaffold_744_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15246..15764
DNA (519bp) protein (173aa)
Predicted integral membrane protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K160_9FIRM
Predicted integral membrane protein
Predicted integral membrane protein {ECO:0000313|EMBL:CBL00009.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_366G1_scaffold_744_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15769..17028
DNA (1260bp) protein (420aa)
Folylpolyglutamate synthase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K161_9FIRM
Folylpolyglutamate synthase
Folylpolyglutamate synthase {ECO:0000313|EMBL:CBL00010.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_366G1_scaffold_744_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17292..17618
DNA (327bp) protein (109aa)
Anti-sigma factor antagonist n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K162_9FIRM
anti-anti-sigma factor
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_366G1_scaffold_744_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17619..18056
DNA (438bp) protein (146aa)
anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor {ECO:0000313|EMBL:CBL00012.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CBL00012.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Anti-sigma F factor n=2 Tax=root RepID=D4K163_9FIRM
L3_083_366G1_scaffold_744_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18079..18753
DNA (675bp) protein (225aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K164_9FIRM
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CBL00013.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_366G1_scaffold_744_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18620..19120)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9X6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22132.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Displaying 21 items

View Taxonomy