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L3_083_366G1_scaffold_871

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_366G1_scaffold_871_1
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(78..533)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=2 Tax=Bacteroides RepID=F7LB39_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFI37444.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_083_366G1_scaffold_871_2
Bacteroides sp. CAG:530, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(609..1604)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:530 RepID=R6CY53_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA77839.1}; TaxID=1262741 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:530.;"
hypothetical protein
L3_083_366G1_scaffold_871_3
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1888..3354)
DNA (1467bp) protein (489aa)
Peptidase, M23 family n=1 Tax=Prevotella copri DSM 18205 RepID=D1PCI1_9BACT
Peptidase, M23 family {ECO:0000313|EMBL:EFB35633.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
membrane-bound metallopeptidase
L3_083_366G1_scaffold_871_4
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3449..4558)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PCI2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB35634.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
L3_083_366G1_scaffold_871_5
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4584..6434)
DNA (1851bp) protein (617aa)
Putative TPR domain protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BP10_9BACT
Putative TPR domain protein {ECO:0000313|EMBL:CDA65878.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_083_366G1_scaffold_871_6
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6477..6914)
DNA (438bp) protein (146aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
dut; dUTP diphosphatase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PCI4_9BACT
L3_083_366G1_scaffold_871_7
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7083..8420
DNA (1338bp) protein (446aa)
dGTPase n=1 Tax=Prevotella copri CAG:164 RepID=R6C354_9BACT
dGTPase {ECO:0000313|EMBL:CDA65876.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
deoxyguanosinetriphosphate triphosphohydrolase
L3_083_366G1_scaffold_871_8
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8454..9743)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BRL2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA65875.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
ATPase
L3_083_366G1_scaffold_871_9
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10065..11060)
DNA (996bp) protein (332aa)
Hemolysin n=1 Tax=Prevotella copri CAG:164 RepID=R6BXV9_9BACT
Hemolysin {ECO:0000313|EMBL:CDA65874.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hemolysin
L3_083_366G1_scaffold_871_10

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comp(11133..11960)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1S2W1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC51993.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
acyltransferase
L3_083_366G1_scaffold_871_11
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12317..13231
DNA (915bp) protein (305aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Prevotella copri CAG:164 RepID=R6CKQ5_9BACT
L3_083_366G1_scaffold_871_12
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13228..13734
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PCJ0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB35642.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
L3_083_366G1_scaffold_871_13
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13731..15890
DNA (2160bp) protein (720aa)
Putative penicillin-binding protein 2 n=1 Tax=Prevotella copri CAG:164 RepID=R6BRK7_9BACT
Putative penicillin-binding protein 2 {ECO:0000313|EMBL:CDA65870.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_083_366G1_scaffold_871_14
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15973..17436
DNA (1464bp) protein (488aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Prevotella copri CAG:164 RepID=R6BXV5_9BACT
UDP-N-acetylmuramyl-tripeptide synthetase
L3_083_366G1_scaffold_871_15
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17461..18024
DNA (564bp) protein (188aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PCJ3_9BACT
phospho-N-acetylmuramoyl-pentapeptide-transferase
L3_083_366G1_scaffold_871_16
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18051..18638
DNA (588bp) protein (196aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Prevotella copri CAG:164 RepID=R6BP02_9BACT
phospho-N-acetylmuramoyl-pentapeptide-transferase
L3_083_366G1_scaffold_871_17
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18650..19987
DNA (1338bp) protein (446aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PCJ4_9BACT
L3_083_366G1_scaffold_871_18
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20026..21303
DNA (1278bp) protein (426aa)
Cell cycle protein, FtsW/RodA/SpoVE family n=2 Tax=root RepID=D1PCJ5_9BACT
Cell cycle protein, FtsW/RodA/SpoVE family {ECO:0000313|EMBL:EFB35647.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
FtsW/RodA/SpoVE family cell cycle protein
L3_083_366G1_scaffold_871_19
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21395..22501
DNA (1107bp) protein (369aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Prevotella copri CAG:164 RepID=R6BRK3_9BACT
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
L3_083_366G1_scaffold_871_20
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22501..23877
DNA (1377bp) protein (459aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|SAAS:SAAS00243344};; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
UDP-N-acetylmuramate--L-alanine ligase n=3 Tax=root RepID=D1PCJ7_9BACT
putative UDP-N-acetylmuramate--L-alanine ligase
L3_083_366G1_scaffold_871_21
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23878..24672
DNA (795bp) protein (265aa)
Putative cell division protein FtsQ n=1 Tax=Prevotella copri CAG:164 RepID=R6BNZ7_9BACT
Putative cell division protein FtsQ {ECO:0000313|EMBL:CDA65863.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_083_366G1_scaffold_871_22
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24712..26157
DNA (1446bp) protein (482aa)
Cell division protein ftsA n=1 Tax=Prevotella copri CAG:164 RepID=R6CKP4_9BACT
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
cell division protein FtsA
L3_083_366G1_scaffold_871_23
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26247..27581
DNA (1335bp) protein (445aa)
Cell division protein FtsZ n=2 Tax=root RepID=R6C341_9BACT
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
ftsZ_3; cell division protein FtsZ
L3_083_366G1_scaffold_871_24
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27645..28370)
DNA (726bp) protein (242aa)
DNA repair protein RecO n=1 Tax=Prevotella copri CAG:164 RepID=R6BRJ7_9BACT
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
recO; DNA repair protein RecO
L3_083_366G1_scaffold_871_25

Not on your lists


28604..28858
DNA (255bp) protein (85aa)
30S ribosomal protein S20 n=3 Tax=root RepID=D1PCK2_9BACT
30S ribosomal protein S20 {ECO:0000313|EMBL:EKC67869.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
rpsT; 30S ribosomal protein S20
L3_083_366G1_scaffold_871_26
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29166..31136
DNA (1971bp) protein (657aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
gyrB; DNA gyrase, B subunit (EC:5.99.1.3)
DNA gyrase subunit B n=2 Tax=root RepID=D1PCK4_9BACT
L3_083_366G1_scaffold_871_27
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31225..33597
DNA (2373bp) protein (791aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PCK5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB35657.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
L3_083_366G1_scaffold_871_28
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33721..34446
DNA (726bp) protein (242aa)
Alpha-L-rhamnosidase domain protein n=1 Tax=Prevotella copri CAG:164 RepID=R6C336_9BACT
Alpha-L-rhamnosidase domain protein {ECO:0000313|EMBL:CDA65856.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
alpha-L-rhamnosidase family protein
L3_083_366G1_scaffold_871_29
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34529..35164)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PCK7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB35659.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
Protein of unknown function (DUF3109)
L3_083_366G1_scaffold_871_30
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35258..35923)
DNA (666bp) protein (222aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
ung; uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase n=1 Tax=Prevotella copri CAG:164 RepID=R6BXT8_9BACT
Displaying items 1-30 of 56 in total

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