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L3_083_366G1_scaffold_1750

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_366G1_scaffold_1750_1
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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53..445
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=31 Tax=Haemophilus RepID=RS8_HAEI8
SSU ribosomal protein S8p (S15Ae)
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
L3_083_366G1_scaffold_1750_2
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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461..994
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=2 Tax=Haemophilus parainfluenzae RepID=F0ERJ9_HAEPA
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=888828 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae ATCC 33392.;"
50S ribosomal protein L6
L3_083_366G1_scaffold_1750_3
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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1008..1361
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=4 Tax=Haemophilus parainfluenzae RepID=E1W372_HAEP3
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=888828 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae ATCC 33392.;"
L3_083_366G1_scaffold_1750_4
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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1376..1876
DNA (501bp) protein (167aa)
30S ribosomal protein S5 n=4 Tax=Haemophilus parainfluenzae RepID=E1W373_HAEP3
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=888828 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae ATCC 33392.;"
L3_083_366G1_scaffold_1750_5
Haemophilus aegyptius, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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1883..2062
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=56 Tax=Pasteurellaceae RepID=RL30_ACTSZ
rpmD; 50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=888728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus aegyptius ATCC 11116.;"
L3_083_366G1_scaffold_1750_6
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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2067..2501
DNA (435bp) protein (145aa)
50S ribosomal protein L15 n=4 Tax=Haemophilus parainfluenzae RepID=E1W375_HAEP3
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1095746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae HK2019.;"
L3_083_366G1_scaffold_1750_7
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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2509..3834
DNA (1326bp) protein (442aa)
Protein translocase subunit SecY n=4 Tax=Haemophilus parainfluenzae RepID=E1W376_HAEP3
preprotein translocase membrane subunit
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=888828 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae ATCC 33392.;"
L3_083_366G1_scaffold_1750_8
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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3863..3976
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=33 Tax=Pasteurellaceae RepID=RL36_HAEIE
rpmJ; Ribosomal protein B
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=374927 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae 22.1-21.;"
L3_083_366G1_scaffold_1750_9
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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4118..4474
DNA (357bp) protein (119aa)
30S ribosomal protein S13 n=13 Tax=Pasteurellaceae RepID=C9R2E3_AGGAD
30S ribosomal protein S13p/S18e
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1095746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae HK2019.;"
L3_083_366G1_scaffold_1750_10
Aggregatibacter actinomycetemcomitans, Aggregatibacter, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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4491..4880
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=43 Tax=Pasteurellaceae RepID=RS11_HAEI8
rpS11; 30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1089447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Aggregatibacter.;" source="Aggregatibacter actinomycetemcomitans RhAA1.;"
L3_083_366G1_scaffold_1750_11
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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4910..5530
DNA (621bp) protein (207aa)
30S ribosomal protein S4 n=11 Tax=Haemophilus RepID=F0ERK7_HAEPA
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
rpsD; 30S ribosomal protein S4
L3_083_366G1_scaffold_1750_12
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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5562..6551
DNA (990bp) protein (330aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1095746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae HK2019.;"
DNA-directed RNA polymerase subunit alpha n=4 Tax=Haemophilus parainfluenzae RepID=E1W381_HAEP3
RNA polymerase subunit alpha
L3_083_366G1_scaffold_1750_13
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6592..6975
DNA (384bp) protein (128aa)
50S ribosomal protein L17 n=5 Tax=Haemophilus RepID=E1W382_HAEP3
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=862965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae (strain T3T1).;"
L3_083_366G1_scaffold_1750_14
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7034..7693)
DNA (660bp) protein (220aa)
Pseudouridine synthase A {ECO:0000313|EMBL:EIJ29970.1}; EC=5.4.99.- {ECO:0000313|EMBL:EIJ29970.1};; TaxID=1095746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae HK2019.;"
Pseudouridine synthase n=2 Tax=Haemophilus parainfluenzae RepID=F0ERL0_HAEPA
pseudouridine synthase
L3_083_366G1_scaffold_1750_15
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7695..8174)
DNA (480bp) protein (160aa)
RNA polymerase-associated protein RapA {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010031}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010033};; ATP-dependent helicase HepA {ECO:0000256|HAMAP-Rule:MF_01821}; TaxID=862965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae (strain T3T1).;"
RNA polymerase-associated protein RapA n=1 Tax=Haemophilus parainfluenzae HK262 RepID=I2J0R9_HAEPA
RNA polymerase-associated helicase
Displaying 15 items

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