ggKbase home page

L3_083_366G1_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 204 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_366G1_scaffold_12_1
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..147)
DNA (147bp) protein (49aa)
Transposase ISNCY family protein n=1 Tax=Eubacterium sp. CAG:161 RepID=R5KPC8_9FIRM
Transposase ISNCY family protein {ECO:0000313|EMBL:CCY68650.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
transposase
L3_083_366G1_scaffold_12_2
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(541..1836)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NB93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10040.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_083_366G1_scaffold_12_3
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2052..3359
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9A4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10039.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_083_366G1_scaffold_12_4
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3469..4092
DNA (624bp) protein (208aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Eubacterium sp. CAG:76 RepID=R7ND59_9FIRM
ruvA; Holliday junction DNA helicase RuvA
L3_083_366G1_scaffold_12_5
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4191..5189
DNA (999bp) protein (333aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Eubacterium sp. CAG:76 RepID=R7ND29_9FIRM
ruvB; Holliday junction DNA helicase RuvB
L3_083_366G1_scaffold_12_6
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5234..5647
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NBT5_9FIRM
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_083_366G1_scaffold_12_7
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5731..8253
DNA (2523bp) protein (841aa)
Putative protease n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NB89_9FIRM
Putative protease {ECO:0000313|EMBL:CDF10035.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
protease
L3_083_366G1_scaffold_12_8
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8256..9635
DNA (1380bp) protein (460aa)
Cell division protein FtsW n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9A0_9FIRM
Cell division protein FtsW {ECO:0000313|EMBL:CDF10034.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
cell division protein FtsW
L3_083_366G1_scaffold_12_9
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9583..11076
DNA (1494bp) protein (498aa)
Peptidoglycan glycosyltransferase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7ND54_9FIRM
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:CDF10033.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
peptidoglycan glycosyltransferase
L3_083_366G1_scaffold_12_10
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11225..11659
DNA (435bp) protein (145aa)
NUDIX domain-containing protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7ND23_9FIRM
NUDIX domain-containing protein {ECO:0000313|EMBL:CDF10032.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
ADP-ribose pyrophosphatase
L3_083_366G1_scaffold_12_11
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11663..12607
DNA (945bp) protein (315aa)
Glycoside Hydrolase Family 23-like lytic murein transglycosylases n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NBT0_9FIRM
Glycoside Hydrolase Family 23-like lytic murein transglycosylases {ECO:0000313|EMBL:CDF10031.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
glycoside hydrolase family 23-like lytic murein transglycosylase
L3_083_366G1_scaffold_12_12
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12701..13024
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NB84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10030.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_083_366G1_scaffold_12_13
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13279..14559
DNA (1281bp) protein (427aa)
Diaminopimelate decarboxylase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N994_9FIRM
Diaminopimelate decarboxylase {ECO:0000313|EMBL:CDF10029.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
diaminopimelate decarboxylase
L3_083_366G1_scaffold_12_14
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14594..15994
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7ND48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10028.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_083_366G1_scaffold_12_15
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16039..16368
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7ND17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10027.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_083_366G1_scaffold_12_16
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16383..17492
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NBS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10026.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_083_366G1_scaffold_12_17
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17508..17909
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NB79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10025.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_083_366G1_scaffold_12_18
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18028..18168
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N990_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10024.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_083_366G1_scaffold_12_19
Eubacterium sp. CAG:248, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18276..18461
DNA (186bp) protein (62aa)
50S ribosomal protein L28 n=3 Tax=environmental samples RepID=R6K4D2_9FIRM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1262885 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:248.;"
LSU ribosomal protein L28P
L3_083_366G1_scaffold_12_20
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18681..19040
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7ND13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10022.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_083_366G1_scaffold_12_21
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19097..20797
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NBR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10021.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_083_366G1_scaffold_12_22
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20870..22924
DNA (2055bp) protein (685aa)
ATP-dependent DNA helicase RecG n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NB74_9FIRM
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:CDF10020.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
ATP-dependent DNA helicase RecG
L3_083_366G1_scaffold_12_23
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22937..23167
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N985_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10019.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_083_366G1_scaffold_12_24
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23247..24605
DNA (1359bp) protein (453aa)
Transporter n=1 Tax=Eubacterium sp. CAG:76 RepID=R7ND38_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Na+-dependent transporters of the SNF family
L3_083_366G1_scaffold_12_25
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24800..26296
DNA (1497bp) protein (499aa)
Stage IV sporulation protein A n=1 Tax=Eubacterium sp. CAG:76 RepID=R7ND08_9FIRM
Stage IV sporulation protein A {ECO:0000313|EMBL:CDF10017.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
stage IV sporulation protein A
L3_083_366G1_scaffold_12_26
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26384..26908
DNA (525bp) protein (175aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Adenine phosphoribosyltransferase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NBR4_9FIRM
adenine phosphoribosyltransferase
L3_083_366G1_scaffold_12_27
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26949..27731
DNA (783bp) protein (261aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NB67_9FIRM
purine-nucleoside phosphorylase
L3_083_366G1_scaffold_12_28
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27731..29440
DNA (1710bp) protein (570aa)
DNA mismatch repair protein MSH4 n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N979_9FIRM
DNA mismatch repair protein MSH4 {ECO:0000313|EMBL:CDF10014.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
DNA mismatch repair protein MSH4
L3_083_366G1_scaffold_12_29
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29511..29660
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7ND33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10013.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_083_366G1_scaffold_12_30
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


29626..32301
DNA (2676bp) protein (892aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Alanine--tRNA ligase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7ND02_9FIRM
alaS; alanyl-tRNA synthetase
Displaying items 1-30 of 204 in total

View Taxonomy