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L3_083_366G1_scaffold_20

Search features with annotation key words

Displaying items 1-30 of 154 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_366G1_scaffold_20_1
unknown

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3..86
DNA (84bp) protein (28aa)

This feature has no annotations

L3_083_366G1_scaffold_20_2
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(132..1115)
DNA (984bp) protein (328aa)
Uncharacterized protein n=2 Tax=root RepID=B5CP53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY32959.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L3_083_366G1_scaffold_20_3
unknown

Not on your lists

comp(1127..1243)
DNA (117bp) protein (39aa)

This feature has no annotations

L3_083_366G1_scaffold_20_4
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1342..1671)
DNA (330bp) protein (110aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P066_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CCZ03051.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical protein
L3_083_366G1_scaffold_20_5
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1717..3096)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NCV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10600.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_083_366G1_scaffold_20_6
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3285..3548)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NDF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10601.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_083_366G1_scaffold_20_7
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3621..6284)
DNA (2664bp) protein (888aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:252 RepID=R6JYH1_9FIRM
hypothetical protein
L3_083_366G1_scaffold_20_8
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6517..7578)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NER4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10603.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
trigger factor
L3_083_366G1_scaffold_20_9
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7788..8144)
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NAT6_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
rplT; 50S ribosomal protein L20
L3_083_366G1_scaffold_20_10
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(8187..8384)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=4 Tax=environmental samples RepID=R5E4I4_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
rpmI; 50S ribosomal protein L35
L3_083_366G1_scaffold_20_11
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8428..8922)
DNA (495bp) protein (165aa)
Translation initiation factor IF-3 n=1 Tax=Eubacterium sp. CAG:252 RepID=R6JWY0_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
translation initiation factor IF-3
L3_083_366G1_scaffold_20_12
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9172..10437)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NEN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10607.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_083_366G1_scaffold_20_13
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10540..11547
DNA (1008bp) protein (336aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NER8_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDF10608.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
N-acetylmuramoyl-L-alanine amidase
L3_083_366G1_scaffold_20_14
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11672..12715)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NAU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10609.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
L3_083_366G1_scaffold_20_15
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12712..13269)
DNA (558bp) protein (186aa)
RNA polymerase sigma-70 factor ECF subfamily n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NCW3_9FIRM
RNA polymerase sigma-70 factor ECF subfamily {ECO:0000313|EMBL:CDF10610.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
ECF subfamily RNA polymerase sigma-70 factor
L3_083_366G1_scaffold_20_16
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13375..14361)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NDG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10611.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
L3_083_366G1_scaffold_20_17
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14324..14836)
DNA (513bp) protein (171aa)
Dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NEN9_9FIRM
Dihydrofolate reductase {ECO:0000313|EMBL:CDF10612.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
L3_083_366G1_scaffold_20_18
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14833..16074)
DNA (1242bp) protein (414aa)
GTPase HflX n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NES2_9FIRM
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
GTP-binding protein HflX
L3_083_366G1_scaffold_20_19
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16157..17875)
DNA (1719bp) protein (573aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NAU4_9FIRM
hypothetical protein
L3_083_366G1_scaffold_20_20
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17925..19733)
DNA (1809bp) protein (603aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NCX0_9FIRM
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CDF10615.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
glycerophosphoryl diester phosphodiesterase
L3_083_366G1_scaffold_20_21
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19749..20384)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NDH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10616.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_083_366G1_scaffold_20_22
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20356..20952)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NEP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10617.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
phosphatidylglycerophosphate synthase
L3_083_366G1_scaffold_20_23
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21053..22306)
DNA (1254bp) protein (418aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Isocitrate dehydrogenase [NADP] n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NES7_9FIRM
isocitrate dehydrogenase
L3_083_366G1_scaffold_20_24
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22582..24423
DNA (1842bp) protein (614aa)
Asparagine synthetase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NAU8_9FIRM
Asparagine synthetase {ECO:0000313|EMBL:CDF10619.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
asparagine synthase
L3_083_366G1_scaffold_20_25
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24647..26929)
DNA (2283bp) protein (761aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NCX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10620.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
ABC-type transport system, involved in lipoprotein release, permease component
L3_083_366G1_scaffold_20_26
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26958..27656)
DNA (699bp) protein (233aa)
ABC transporter ATP-binding protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NDH8_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDF10621.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
putative ABC transporter ATP-binding protein MG065
L3_083_366G1_scaffold_20_27
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27872..29962)
DNA (2091bp) protein (697aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NEP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10622.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_083_366G1_scaffold_20_28
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29996..30307)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:252 RepID=R6L5E0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB69452.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
hypothetical protein
L3_083_366G1_scaffold_20_29
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30453..30911)
DNA (459bp) protein (153aa)
Ferric uptake regulator Fur family protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NAV3_9FIRM
Ferric uptake regulator Fur family protein {ECO:0000313|EMBL:CDF10624.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Fur family ferric uptake regulator protein
L3_083_366G1_scaffold_20_30
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30926..31057)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NCY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10625.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
conserved hypothetical protein
Displaying items 1-30 of 154 in total

View Taxonomy