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L3_083_366G1_scaffold_76

Search features with annotation key words

Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_366G1_scaffold_76_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..114)
DNA (114bp) protein (38aa)
Two-component system, OmpR family, phosphate regulon response regulator (Fragment) n=1 Tax=human gut metagenome RepID=K1UA80_9ZZZZ
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CBL12428.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_083_366G1_scaffold_76_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(506..748)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DYQ0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR76102.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_083_366G1_scaffold_76_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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928..2196
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79773.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted ATPase (AAA+ superfamily)
L3_083_366G1_scaffold_76_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2344..2955)
DNA (612bp) protein (204aa)
HAD superfamily hydrolase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UVL8_9FIRM
HAD superfamily hydrolase {ECO:0000313|EMBL:CCZ79774.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
HAD superfamily hydrolase
L3_083_366G1_scaffold_76_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2948..4675)
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79775.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_083_366G1_scaffold_76_6
unknown

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comp(4753..5010)
DNA (258bp) protein (86aa)

This feature has no annotations

L3_083_366G1_scaffold_76_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5102..5425
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8K2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79776.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
rhodanese-like protein
L3_083_366G1_scaffold_76_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5473..6396
DNA (924bp) protein (308aa)
Glycosyl hydrolase family 25 n=1 Tax=Roseburia sp. CAG:18 RepID=R5VG95_9FIRM
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:CCZ79777.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
L3_083_366G1_scaffold_76_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6419..7531)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79778.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_083_366G1_scaffold_76_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7753..8076
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UVM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79779.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted transcriptional regulators
L3_083_366G1_scaffold_76_11
unknown

Not on your lists

comp(8176..8472)
DNA (297bp) protein (99aa)

This feature has no annotations

L3_083_366G1_scaffold_76_12
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8450..9730)
DNA (1281bp) protein (427aa)
NDT80/PhoG like DNA-binding family protein n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5QE83_9FIRM
NDT80/PhoG like DNA-binding family protein {ECO:0000313|EMBL:CCZ20531.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
transcriptional regulator
L3_083_366G1_scaffold_76_13
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9894..10220
DNA (327bp) protein (109aa)
18 kDa heat shock protein (HSP 18) n=1 Tax=Clostridium sp. CAG:448 RepID=R6SN48_9CLOT
18 kDa heat shock protein (HSP 18) {ECO:0000313|EMBL:CDC61355.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
heat shock protein Hsp20
L3_083_366G1_scaffold_76_14
Prevotella sp. CAG:1320, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10265..10426
DNA (162bp) protein (54aa)
Rubredoxin n=1 Tax=Prevotella sp. CAG:1320 RepID=R6ED51_9BACT
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=1262922 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1320.;"
Rubredoxin
L3_083_366G1_scaffold_76_15
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10476..10676)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62644.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L3_083_366G1_scaffold_76_16
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10809..11651
DNA (843bp) protein (281aa)
Transcriptional regulator AraC family n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1F3_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDE20613.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
xylan 1,4-beta-xylosidase
L3_083_366G1_scaffold_76_17
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(11638..12822)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XPK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA14454.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
NuoF; NADH:ubiquinone oxidoreductase, NADH-binding 51 kDa subunit
L3_083_366G1_scaffold_76_18
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12823..14940)
DNA (2118bp) protein (706aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JLL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37987.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L3_083_366G1_scaffold_76_19
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(14968..16419)
DNA (1452bp) protein (484aa)
fccA2; fumarate reductase flavoprotein subunit FccA (EC:1.3.99.1)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XI30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA15173.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
L3_083_366G1_scaffold_76_20
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16429..17481)
DNA (1053bp) protein (351aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JLL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37993.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L3_083_366G1_scaffold_76_21
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17509..18564)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A4F4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ24237.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
xylose isomerase-like TIM barrel
L3_083_366G1_scaffold_76_22
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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comp(18580..18975)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XGC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA14583.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
hypothetical protein
L3_083_366G1_scaffold_76_23
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(18995..20107)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5YDG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA14582.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
oxidoreductase
L3_083_366G1_scaffold_76_24
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(20141..21061)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5Y036_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA14581.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
AP-endonuclease/AP-lyase
L3_083_366G1_scaffold_76_25
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(21248..23659)
DNA (2412bp) protein (804aa)
xynB8; beta-xylosidase XynB (EC:3.2.1.37)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5YDG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA14577.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
L3_083_366G1_scaffold_76_26
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(23758..25143)
DNA (1386bp) protein (462aa)
Putative xylose transporter n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5YDD5_9FIRM
Putative xylose transporter {ECO:0000313|EMBL:CDA14537.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
sugar (glycoside-pentoside-hexuronide) transporter
L3_083_366G1_scaffold_76_27
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25171..26133)
DNA (963bp) protein (321aa)
Putative FMN reductase n=1 Tax=Clostridium sp. D5 RepID=F0YU21_9CLOT
Putative FMN reductase {ECO:0000313|EMBL:EGB94391.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
multimeric flavodoxin WrbA
L3_083_366G1_scaffold_76_28
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(26292..28697)
DNA (2406bp) protein (802aa)
xynB8; beta-xylosidase XynB (EC:3.2.1.37)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XPL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA14464.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
L3_083_366G1_scaffold_76_29
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(28876..30042)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XK11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA15170.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
cyanate permease
L3_083_366G1_scaffold_76_30
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30282..31757)
DNA (1476bp) protein (492aa)
Methicillin resistance protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z6S8_EUBE2
methicillin resistance protein
Methicillin resistance protein {ECO:0000313|EMBL:ACR73670.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
Displaying items 1-30 of 103 in total

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