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L3_083_366G1_scaffold_246

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_366G1_scaffold_246_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..236
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=D4KS25_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09677.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_083_366G1_scaffold_246_2
unknown

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385..558
DNA (174bp) protein (58aa)

This feature has no annotations

L3_083_366G1_scaffold_246_3
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

560..838
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:156 RepID=R5Z4I5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA28971.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
hypothetical protein
L3_083_366G1_scaffold_246_4
unknown

Not on your lists

1074..1208
DNA (135bp) protein (45aa)

This feature has no annotations

L3_083_366G1_scaffold_246_5
Selenomonas ruminantium, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1199..1756
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Selenomonas ruminantium RepID=Q2PYV3_SELRU
Putative uncharacterized protein {ECO:0000313|EMBL:ABC18252.1}; TaxID=971 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas ruminantium.;"
hypothetical protein
L3_083_366G1_scaffold_246_6
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1771..3372
DNA (1602bp) protein (534aa)
Putative membrane protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R752_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDF45676.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
Spermidine synthase
L3_083_366G1_scaffold_246_7
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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3385..4275
DNA (891bp) protein (297aa)
Transcriptional regulator, LysR family n=2 Tax=root RepID=A6BGE2_9FIRM
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EDM63353.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Transcriptional regulator
L3_083_366G1_scaffold_246_8
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4410..4763
DNA (354bp) protein (118aa)
2,5-didehydrogluconate reductase (Fragment) n=1 Tax=human gut metagenome RepID=K1SA10_9ZZZZ
Aldo/keto reductases, related to diketogulonate reductase
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EDM51907.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_083_366G1_scaffold_246_9
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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5509..6696
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F8BCD2
Beta-lactamase {ECO:0000313|EMBL:CCY21888.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
beta-lactamase
L3_083_366G1_scaffold_246_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6717..9866
DNA (3150bp) protein (1050aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KVF5_9FIRM
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
L3_083_366G1_scaffold_246_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9981..12323
DNA (2343bp) protein (781aa)
Ferrous iron transporter FeoB n=1 Tax=Roseburia sp. CAG:18 RepID=R5VDU2_9FIRM
Ferrous iron transporter FeoB {ECO:0000313|EMBL:CCZ78937.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ferrous iron transporter FeoB
L3_083_366G1_scaffold_246_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12399..13283
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V653_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78936.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_083_366G1_scaffold_246_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13593..15371
DNA (1779bp) protein (593aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULL7_9FIRM
L3_083_366G1_scaffold_246_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15473..16864)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78934.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Na+-driven multidrug efflux pump
L3_083_366G1_scaffold_246_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17057..17836
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78933.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_083_366G1_scaffold_246_16
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18115..18594
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BDH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA57146.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_083_366G1_scaffold_246_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18869..19630
DNA (762bp) protein (254aa)
Mo-nitrogenase iron protein subunit NifH (EC:1.18.6.1)
Putative nitrogenase iron protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VDT7_9FIRM
Putative nitrogenase iron protein {ECO:0000313|EMBL:CCZ78932.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_083_366G1_scaffold_246_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19627..20907
DNA (1281bp) protein (427aa)
Oxidoreductase nitrogenase component 1 n=1 Tax=Roseburia sp. CAG:18 RepID=R5V647_9FIRM
Oxidoreductase nitrogenase component 1 {ECO:0000313|EMBL:CCZ78931.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Nitrogenase molybdenum-iron protein, alpha and beta chains
L3_083_366G1_scaffold_246_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20912..21958
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78930.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Nitrogenase molybdenum-iron protein, alpha and beta chains
L3_083_366G1_scaffold_246_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22021..24351
DNA (2331bp) protein (777aa)
Carbamoyltransferase HypF n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTA3_9FIRM
Carbamoyltransferase HypF {ECO:0000313|EMBL:CCZ78929.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
[NiFe] hydrogenase maturation protein HypF
L3_083_366G1_scaffold_246_21
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24364..24573
DNA (210bp) protein (70aa)
Hydrogenase assembly chaperone HypC/HupF n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2NX55_9FIRM
Hydrogenase assembly chaperone HypC/HupF {ECO:0000313|EMBL:ERK42665.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hydrogenase assembly chaperone HypC/HupF
L3_083_366G1_scaffold_246_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24573..25601
DNA (1029bp) protein (343aa)
Hydrogenase expression/formation protein HypD n=1 Tax=Roseburia sp. CAG:18 RepID=R5VDT1_9FIRM
Hydrogenase expression/formation protein HypD {ECO:0000313|EMBL:CCZ78927.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Hydrogenase maturation factor
L3_083_366G1_scaffold_246_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25621..26628
DNA (1008bp) protein (336aa)
Hydrogenase expression/formation protein HypE n=1 Tax=Roseburia sp. CAG:18 RepID=R5V641_9FIRM
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:CCZ78926.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hydrogenase expression/formation protein HypE
L3_083_366G1_scaffold_246_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26645..26920
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78925.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_083_366G1_scaffold_246_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26917..27726
DNA (810bp) protein (270aa)
Nitrogenase subunit NifH (ATPase) (EC:1.18.6.1)
Putative nitrogenase iron protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UT98_9FIRM
Putative nitrogenase iron protein {ECO:0000313|EMBL:CCZ78924.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_083_366G1_scaffold_246_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27726..29063
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78923.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Nitrogenase component 1 type Oxidoreductase.
L3_083_366G1_scaffold_246_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29051..30169
DNA (1119bp) protein (373aa)
Nitrogenase molybdenum-iron protein alpha and beta chains n=1 Tax=Roseburia sp. CAG:18 RepID=R5VDS6_9FIRM
Nitrogenase molybdenum-iron protein alpha and beta chains {ECO:0000313|EMBL:CCZ78922.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Nitrogenase molybdenum-iron protein, alpha and beta chains
L3_083_366G1_scaffold_246_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30541..31935
DNA (1395bp) protein (465aa)
Amino acid carrier protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULK1_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:CCZ78920.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
amino acid carrier protein
L3_083_366G1_scaffold_246_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32022..32462
DNA (441bp) protein (147aa)
YqeY-like protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UT94_9FIRM
YqeY-like protein {ECO:0000313|EMBL:CCZ78919.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_083_366G1_scaffold_246_30
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32475..33566
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IT58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE53842.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
alcohol dehydrogenase
Displaying items 1-30 of 41 in total

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