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L3_083_366G1_scaffold_641

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_366G1_scaffold_641_1
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..230)
DNA (228bp) protein (76aa)
MATE efflux family protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6T6I8_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:ERI71971.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L3_083_366G1_scaffold_641_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(464..2182)
DNA (1719bp) protein (573aa)
Oligo-1 6-glucosidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM10_9FIRM
Oligo-1 6-glucosidase {ECO:0000313|EMBL:CCZ79338.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
glycosidase
L3_083_366G1_scaffold_641_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2257..4443)
DNA (2187bp) protein (729aa)
YhgE/Pip domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUF1_9FIRM
YhgE/Pip domain protein {ECO:0000313|EMBL:CCZ79339.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_083_366G1_scaffold_641_4
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4440..6980)
DNA (2541bp) protein (847aa)
YhgE/Pip domain protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7E916_9FIRM
YhgE/Pip domain protein {ECO:0000313|EMBL:CDD99220.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
YhgE/Pip N-terminal domain/YhgE/Pip C-terminal domain
L3_083_366G1_scaffold_641_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7153..9708)
DNA (2556bp) protein (852aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79868.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type antimicrobial peptide transport system, permease component
L3_083_366G1_scaffold_641_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9711..10382)
DNA (672bp) protein (224aa)
ABC-type antimicrobial peptide transport system ATPase component n=1 Tax=Roseburia sp. CAG:18 RepID=R5UVW7_9FIRM
ABC-type antimicrobial peptide transport system ATPase component {ECO:0000313|EMBL:CCZ79869.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_083_366G1_scaffold_641_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10461..11726)
DNA (1266bp) protein (422aa)
sensor histidine kinase (EC:2.7.3.-)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UP57_9FIRM
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:CCZ79870.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_083_366G1_scaffold_641_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11726..12031)
DNA (306bp) protein (102aa)
DNA damage-inducible protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQR2_9FIRM
DNA damage-inducible protein {ECO:0000313|EMBL:CCZ78079.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
RelB/DinJ family addiction module antitoxin
L3_083_366G1_scaffold_641_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12077..12769)
DNA (693bp) protein (231aa)
Two component transcriptional regulator winged helix family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJ98_9FIRM
Two component transcriptional regulator winged helix family {ECO:0000313|EMBL:CCZ78080.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
two-component response regulator
L3_083_366G1_scaffold_641_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12817..13926)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3V2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78081.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_083_366G1_scaffold_641_11
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13955..14458)
DNA (504bp) protein (168aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0P526_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKY23744.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_083_366G1_scaffold_641_12
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14412..15035)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DIB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75681.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L3_083_366G1_scaffold_641_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15065..15928)
DNA (864bp) protein (288aa)
ABC transporter ATP-binding protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V459_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ78231.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type multidrug transport system, ATPase component
L3_083_366G1_scaffold_641_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15906..16679)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78230.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_083_366G1_scaffold_641_15
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16676..17224)
DNA (549bp) protein (183aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Dorea sp. CAG:105 RepID=R5D694_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:CCX75678.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
RNA polymerase sigma factor, sigma-70 family
L3_083_366G1_scaffold_641_16
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17364..19652)
DNA (2289bp) protein (763aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
methionine synthase (B12-independent) (EC:2.1.1.14)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Clostridium sp. CAG:964 RepID=R6V6I5_9CLOT
L3_083_366G1_scaffold_641_17

Not on your lists

comp(19739..21418)
DNA (1680bp) protein (560aa)
Carbohydrate-active enzyme n=1 Tax=uncultured organism RepID=D9ZF47_9ZZZZ
Carbohydrate-active enzyme {ECO:0000313|EMBL:ADD61951.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
glycoside hydrolase
L3_083_366G1_scaffold_641_18
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21523..21765)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2CZ24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI95779.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
Displaying 18 items

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