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L3_098_000G1_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 708 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000G1_scaffold_0_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(411..1052)
DNA (642bp) protein (214aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
uracil phosphoribosyltransferase n=1 Tax=Varibaculum cambriense RepID=UPI0003B609CA
L3_098_000G1_scaffold_0_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1188..2099
DNA (912bp) protein (304aa)
transcriptional regulator n=1 Tax=Varibaculum cambriense RepID=UPI0003B4C66D
Uncharacterized protein {ECO:0000313|EMBL:ETI81720.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_098_000G1_scaffold_0_3
Actinomyces sp. S4-C9, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2130..2816
DNA (687bp) protein (229aa)
short-chain dehydrogenase n=2 Tax=Varibaculum cambriense RepID=UPI0003B39562
Short-chain dehydrogenase {ECO:0000313|EMBL:KGF02073.1}; TaxID=1219581 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S4-C9.;"
short chain dehydrogenase
L3_098_000G1_scaffold_0_4
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2813..3811)
DNA (999bp) protein (333aa)
sugar phosphate isomerase n=1 Tax=Varibaculum cambriense RepID=UPI0003B568F0
Sugar (Xylose) phosphate isomerase/epimerase {ECO:0000313|EMBL:CEI28176.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii.;"
xylose phosphate isomerase/epimerase
L3_098_000G1_scaffold_0_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3838..5022)
DNA (1185bp) protein (395aa)
dehydrogenase n=1 Tax=Varibaculum cambriense RepID=UPI0003B5E8A9
Uncharacterized protein {ECO:0000313|EMBL:ETI81725.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
inositol 2-dehydrogenase
L3_098_000G1_scaffold_0_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5267..6283
DNA (1017bp) protein (339aa)
UPI0003D65FCB related cluster n=1 Tax=unknown RepID=UPI0003D65FCB
LacI family transcriptional regulator {ECO:0000313|EMBL:ETI81726.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
transcriptional regulator, LacI family (HTH-type transcriptional regulator degA)
L3_098_000G1_scaffold_0_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6553..8214)
DNA (1662bp) protein (554aa)
major facilitator transporter n=1 Tax=Varibaculum cambriense RepID=UPI0003B6F437
Uncharacterized protein {ECO:0000313|EMBL:ETI81729.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
MFS family major facilitator transporter
L3_098_000G1_scaffold_0_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8246..9256)
DNA (1011bp) protein (337aa)
Inositol 2-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01671, ECO:0000256|SAAS:SAAS00010088}; EC=1.1.1.18 {ECO:0000256|HAMAP-Rule:MF_01671, ECO:0000256|SAAS:SAAS00010088};; Myo-inositol 2-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01671}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
inositol 2-dehydrogenase (EC:1.1.1.18)
inositol 2-dehydrogenase n=1 Tax=Varibaculum cambriense RepID=UPI0003B7B180
L3_098_000G1_scaffold_0_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9390..10325)
DNA (936bp) protein (312aa)
xylose isomerase domain-containing protein (EC:4.2.1.44)
myo-inosose-2 dehydratase n=1 Tax=Varibaculum cambriense RepID=UPI0003B489C6
Uncharacterized protein {ECO:0000313|EMBL:ETI81731.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_098_000G1_scaffold_0_10
Propionimicrobium lymphophilum, Propionimicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10646..11038)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B403F2
Uncharacterized protein {ECO:0000313|EMBL:EPD33989.1}; TaxID=883161 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionimicrobium.;" source="Propionimicrobium lymphophilum ACS-093-V-SCH5.;"
hypothetical protein
L3_098_000G1_scaffold_0_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11044..11457)
DNA (414bp) protein (138aa)
UPI0003D5F5C9 related cluster n=1 Tax=unknown RepID=UPI0003D5F5C9
Uncharacterized protein {ECO:0000313|EMBL:ETI81732.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_098_000G1_scaffold_0_12
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11467..12141)
DNA (675bp) protein (225aa)
glycosyl transferase n=1 Tax=Varibaculum cambriense RepID=UPI0003B305A1
Putative glycosyl transferase {ECO:0000313|EMBL:GAD35626.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
glycosyl transferase
L3_098_000G1_scaffold_0_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12325..13431
DNA (1107bp) protein (369aa)
stsC; pyridoxal-phosphate-dependent aminotransferase (EC:2.6.1.50)
aminotransferase DegT n=1 Tax=Varibaculum cambriense RepID=UPI0003B38E37
Uncharacterized protein {ECO:0000313|EMBL:ETI81734.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_098_000G1_scaffold_0_14
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13435..14400
DNA (966bp) protein (322aa)
dehydrogenase n=1 Tax=Varibaculum cambriense RepID=UPI0003B41904
Uncharacterized protein {ECO:0000313|EMBL:ETI81735.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
dehydrogenase
L3_098_000G1_scaffold_0_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14485..15588)
DNA (1104bp) protein (368aa)
UPI0003D5F78F related cluster n=1 Tax=unknown RepID=UPI0003D5F78F
O-acyltransferase {ECO:0000313|EMBL:ETI81736.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
acyltransferase 3
L3_098_000G1_scaffold_0_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15841..17136
DNA (1296bp) protein (432aa)
polysaccharide biosynthesis protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B6D7D1
Uncharacterized protein {ECO:0000313|EMBL:ETI81739.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
teichoic acid transporter
L3_098_000G1_scaffold_0_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17178..18245
DNA (1068bp) protein (356aa)
UPI0003D67A0E related cluster n=1 Tax=unknown RepID=UPI0003D67A0E
Uncharacterized protein {ECO:0000313|EMBL:ETI81740.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UDP-N-acetylglucosamine 2-epimerase
L3_098_000G1_scaffold_0_18
Trueperella pyogenes, Trueperella, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18253..19401
DNA (1149bp) protein (383aa)
Glycosyltransferase, group 1 family protein n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZT0_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC70454.1}; TaxID=1435056 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Trueperella.;" source="Trueperella pyogenes TP8.;"
L3_098_000G1_scaffold_0_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19816..21408
DNA (1593bp) protein (531aa)
UPI0003D62CDB related cluster n=1 Tax=unknown RepID=UPI0003D62CDB
PE-PGRS family protein {ECO:0000313|EMBL:ETI81741.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_098_000G1_scaffold_0_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21511..22650
DNA (1140bp) protein (380aa)
UPI0003D6469D related cluster n=1 Tax=unknown RepID=UPI0003D6469D
Uncharacterized protein {ECO:0000313|EMBL:ETI81742.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_098_000G1_scaffold_0_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22673..24157
DNA (1485bp) protein (495aa)
UPI0003D5D041 related cluster n=1 Tax=unknown RepID=UPI0003D5D041
Uncharacterized protein {ECO:0000313|EMBL:ETI81743.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_098_000G1_scaffold_0_22
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24208..25338
DNA (1131bp) protein (377aa)
UPI0003D5FB60 related cluster n=1 Tax=unknown RepID=UPI0003D5FB60
Glycosyltransferase, group 1 family {ECO:0000313|EMBL:ETI81744.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
glycosyltransferase
L3_098_000G1_scaffold_0_23
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25338..26558
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B459D1
Uncharacterized protein {ECO:0000313|EMBL:ETI81745.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
group 1 glycosyl transferase protein
L3_098_000G1_scaffold_0_24
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26572..27750)
DNA (1179bp) protein (393aa)
glycosyltransferase family 1 n=1 Tax=Varibaculum cambriense RepID=UPI0003B3022C
Uncharacterized protein {ECO:0000313|EMBL:ETI81746.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
glycosyl transferase family protein
L3_098_000G1_scaffold_0_25
Actinomyces coleocanis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27765..28361)
DNA (597bp) protein (199aa)
acetylglucosamine-1-phosphate uridylyltransferase n=1 Tax=Varibaculum cambriense RepID=UPI0003B47D80
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EEH63782.1}; TaxID=525245 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces coleocanis DSM 15436.;"
acetylglucosamine-1-phosphate uridylyltransferase
L3_098_000G1_scaffold_0_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28429..29055)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B46EC4
Uncharacterized protein {ECO:0000313|EMBL:ETI81747.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_098_000G1_scaffold_0_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29095..30948)
DNA (1854bp) protein (618aa)
UPI0003D5CB62 related cluster n=1 Tax=unknown RepID=UPI0003D5CB62
Uncharacterized protein {ECO:0000313|EMBL:ETI81748.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_098_000G1_scaffold_0_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31164..32465
DNA (1302bp) protein (434aa)
nucleotide sugar dehydrogenase n=1 Tax=Varibaculum cambriense RepID=UPI0003B4B025
Uncharacterized protein {ECO:0000313|EMBL:ETI81749.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
nucleotide sugar dehydrogenase
L3_098_000G1_scaffold_0_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32484..34565
DNA (2082bp) protein (694aa)
UPI0003D5A7BD related cluster n=1 Tax=unknown RepID=UPI0003D5A7BD
Uncharacterized protein {ECO:0000313|EMBL:ETI81750.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_098_000G1_scaffold_0_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34577..35815)
DNA (1239bp) protein (413aa)
UPI0003D66E07 related cluster n=1 Tax=unknown RepID=UPI0003D66E07
Family 2 glycosyl transferase {ECO:0000313|EMBL:ETI81751.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
family 2 glycosyl transferase
Displaying items 1-30 of 708 in total

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