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L3_098_000G1_scaffold_15

Search features with annotation key words

Displaying items 1-30 of 227 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000G1_scaffold_15_1
unknown

Not on your lists

comp(2..121)
DNA (120bp) protein (40aa)

This feature has no annotations

L3_098_000G1_scaffold_15_2
unknown

Not on your lists

comp(952..1548)
DNA (597bp) protein (199aa)

This feature has no annotations

L3_098_000G1_scaffold_15_3
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2516..3814
DNA (1299bp) protein (433aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Alistipes sp. CAG:268 RepID=R6VJL9_9BACT
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:CDC97160.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
MiaB-like tRNA modifying enzyme
L3_098_000G1_scaffold_15_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3947..4702
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y7F5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24566.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_098_000G1_scaffold_15_5
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4708..6153
DNA (1446bp) protein (482aa)
Trk-type K+ transport systems membrane components n=1 Tax=Alistipes sp. CAG:53 RepID=R5WYN9_9BACT
Trk-type K+ transport systems membrane components {ECO:0000313|EMBL:CCZ97552.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Trk-type K+ transport system, membrane component
L3_098_000G1_scaffold_15_6
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6156..7688
DNA (1533bp) protein (511aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=R5W319_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ97553.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_098_000G1_scaffold_15_7
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7734..8198
DNA (465bp) protein (155aa)
serine protease n=1 Tax=Alistipes onderdonkii RepID=UPI00036DD612
membrane-bound serine protease
Nodulation efficiency protein D {ECO:0000313|EMBL:CDE63808.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L3_098_000G1_scaffold_15_8
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8220..9185
DNA (966bp) protein (322aa)
UPF0365 protein BN590_01598 n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y7F2_9BACT
UPF0365 protein BN590_01598 {ECO:0000256|HAMAP-Rule:MF_01562}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_098_000G1_scaffold_15_9
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9287..10054)
DNA (768bp) protein (256aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=I3YR65_ALIFI
hypothetical protein
Zinc finger CDGSH type {ECO:0000313|EMBL:EFR57086.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_098_000G1_scaffold_15_10
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10204..11619
DNA (1416bp) protein (472aa)
Fibrobacter succinogene major paralogous domain protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JJG9_9BACT
Fibrobacter succinogene major paralogous domain protein {ECO:0000313|EMBL:CDE63821.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_098_000G1_scaffold_15_11
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11656..12924
DNA (1269bp) protein (423aa)
Arabinose efflux permease family protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XNT9_9BACT
Arabinose efflux permease family protein {ECO:0000313|EMBL:CDD25333.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
arabinose efflux permease family protein
L3_098_000G1_scaffold_15_12
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13003..13611)
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H8F5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB92350.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
LuxR family transcriptional regulator
L3_098_000G1_scaffold_15_13
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13595..13966)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H8F4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB92349.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L3_098_000G1_scaffold_15_14
unknown

Not on your lists

comp(14029..14199)
DNA (171bp) protein (57aa)

This feature has no annotations

L3_098_000G1_scaffold_15_15
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14290..15723)
DNA (1434bp) protein (478aa)
Fibrobacter succinogene major paralogous domain protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JJP8_9BACT
Fibrobacter succinogene major paralogous domain protein {ECO:0000313|EMBL:CDE63823.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Fibrobacter succinogenes major domain (Fib_succ_major).
L3_098_000G1_scaffold_15_16
unknown

Not on your lists

comp(15947..16714)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002D7F946
L3_098_000G1_scaffold_15_17
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16946..17548)
DNA (603bp) protein (201aa)
Transcriptional regulator n=1 Tax=Alistipes sp. CAG:53 RepID=R5WNQ3_9BACT
Transcriptional regulator {ECO:0000313|EMBL:CCZ97566.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
transcriptional regulator
L3_098_000G1_scaffold_15_18
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17545..18933)
DNA (1389bp) protein (463aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MTC1_9BACT
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:EDS04546.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
NodT family efflux transporter outer membrane lipoprotein
L3_098_000G1_scaffold_15_19
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18935..22132)
DNA (3198bp) protein (1066aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y228_9BACT
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter {ECO:0000313|EMBL:CDD25324.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
L3_098_000G1_scaffold_15_20
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22136..23251)
DNA (1116bp) protein (372aa)
RND family efflux transporter MFP subunit n=1 Tax=Alistipes sp. CAG:53 RepID=R5WBT1_9BACT
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:CCZ97569.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
RND family efflux transporter MFP subunit
L3_098_000G1_scaffold_15_21
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23415..24293
DNA (879bp) protein (293aa)
DNA-binding domain-containing protein, AraC-type n=3 Tax=Alistipes RepID=I3YR52_ALIFI
DNA-binding domain-containing protein
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFR57133.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_098_000G1_scaffold_15_22
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24494..26383)
DNA (1890bp) protein (630aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6B1F0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA47252.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_098_000G1_scaffold_15_23
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26795..28258
DNA (1464bp) protein (488aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=B7BCA0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78651.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
L3_098_000G1_scaffold_15_24
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28361..29104)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0002EEF2E3
LytTr DNA-binding domain protein {ECO:0000313|EMBL:CDC98970.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
two-component system response regulator
L3_098_000G1_scaffold_15_25
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29101..30150)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002DD7AAD
Histidine kinase {ECO:0000313|EMBL:CDC98972.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
two-component system sensor histidine kinase
L3_098_000G1_scaffold_15_26
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30182..31402)
DNA (1221bp) protein (407aa)
multidrug ABC transporter substrate-binding protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037A7DA0
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDC98979.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
ABC transporter permease
L3_098_000G1_scaffold_15_27
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31406..32146)
DNA (741bp) protein (247aa)
ABC transporter n=1 Tax=Alistipes senegalensis RepID=UPI0002E6F7C4
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC98981.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
ABC transporter ATP-binding protein
L3_098_000G1_scaffold_15_28
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32149..33339)
DNA (1191bp) protein (397aa)
hemolysin D n=1 Tax=Alistipes senegalensis RepID=UPI0002DA09A9
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDE64564.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
efflux system periplasmic protein
L3_098_000G1_scaffold_15_29
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33352..34668)
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI00038056D1
Outer membrane efflux protein {ECO:0000313|EMBL:CDC98987.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
outer membrane efflux protein
L3_098_000G1_scaffold_15_30
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34950..35933)
DNA (984bp) protein (328aa)
Acyl-CoA reductase (LuxC) n=1 Tax=Alistipes sp. CAG:268 RepID=R6VP42_9BACT
Acyl-CoA reductase (LuxC) {ECO:0000313|EMBL:CDC96009.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
NAD-dependent aldehyde dehydrogenase
Displaying items 1-30 of 227 in total

View Taxonomy