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L3_098_000G1_scaffold_34

Search features with annotation key words

Displaying items 1-30 of 185 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000G1_scaffold_34_1
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..475
DNA (474bp) protein (158aa)
DNA-methyltransferase (dcm) (EC:2.1.1.37)
Putative modification methylase HpaII n=2 Tax=root RepID=R6URJ1_9CLOT
Putative modification methylase HpaII {ECO:0000313|EMBL:CDC82811.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
L3_098_000G1_scaffold_34_2
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

468..1559
DNA (1092bp) protein (364aa)
DNA-methyltransferase (dcm) (EC:2.1.1.37)
DNA-methyltransferase (Dcm) n=1 Tax=Clostridium sp. CAG:964 RepID=R6ULC0_9CLOT
DNA-methyltransferase (Dcm) {ECO:0000313|EMBL:CDC82814.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
L3_098_000G1_scaffold_34_3
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1569..2192
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDN3_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA43406.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
L3_098_000G1_scaffold_34_4
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2195..3139
DNA (945bp) protein (315aa)
DNA-methyltransferase (dcm) (EC:2.1.1.37)
AAA domain protein n=2 Tax=root RepID=R6VK16_9CLOT
AAA domain protein {ECO:0000313|EMBL:CDC82817.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
L3_098_000G1_scaffold_34_5
Coprobacillus sp. CAG:826, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3126..4490
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:826 RepID=R7DMS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD91745.1}; TaxID=1262857 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:826.;"
hypothetical protein
L3_098_000G1_scaffold_34_6
Coprobacillus sp. CAG:826, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4679..6667
DNA (1989bp) protein (663aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:826 RepID=R7DMJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD91744.1}; TaxID=1262857 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:826.;"
DNA-binding protein
L3_098_000G1_scaffold_34_7
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6856..7230)
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L9G4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL16259.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_098_000G1_scaffold_34_8
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8042..8326
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GVF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25266.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Uncharacterised protein family (UPF0150).
L3_098_000G1_scaffold_34_9
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9005..10969
DNA (1965bp) protein (655aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MCV6_9FIRM
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EDR97776.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
hypothetical protein
L3_098_000G1_scaffold_34_10
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11179..13293
DNA (2115bp) protein (705aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QK44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK63270.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_098_000G1_scaffold_34_11
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13872..17024)
DNA (3153bp) protein (1051aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
TIGR00375 family protein n=2 Tax=Oscillibacter RepID=U2S6V4_9FIRM
hypothetical protein
L3_098_000G1_scaffold_34_12
unknown

Not on your lists

17102..17206
DNA (105bp) protein (35aa)

This feature has no annotations

L3_098_000G1_scaffold_34_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17238..17645
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TFM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66696.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L3_098_000G1_scaffold_34_14
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17666..18472
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9L0P2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS52118.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
hypothetical protein
L3_098_000G1_scaffold_34_15
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18672..19721)
DNA (1050bp) protein (350aa)
GroES-like protein n=2 Tax=Oscillibacter RepID=U2QY07_9FIRM
GroES-like protein {ECO:0000313|EMBL:ERK67815.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
zinc-type alcohol dehydrogenase
L3_098_000G1_scaffold_34_16
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19940..20359)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PAG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS11552.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_098_000G1_scaffold_34_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20368..20736)
DNA (369bp) protein (123aa)
Toxin-antitoxin system, antitoxin component, Xre domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWB7_9FIRM
Toxin-antitoxin system, antitoxin component, Xre domain protein {ECO:0000313|EMBL:EHM39170.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
helix-turn-helix domain-containing protein
L3_098_000G1_scaffold_34_18
unknown

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21209..21445
DNA (237bp) protein (79aa)

This feature has no annotations

L3_098_000G1_scaffold_34_19
unknown

Not on your lists

21485..21784
DNA (300bp) protein (100aa)

This feature has no annotations

L3_098_000G1_scaffold_34_20
unknown

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21742..21984
DNA (243bp) protein (81aa)

This feature has no annotations

L3_098_000G1_scaffold_34_21
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22295..23491
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AIH1_9CLOT
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:CCZ25990.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_098_000G1_scaffold_34_22
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

23506..23796
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5ADH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX40778.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
hypothetical protein
L3_098_000G1_scaffold_34_23
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23812..24141
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003711EF7
Uncharacterized protein {ECO:0000313|EMBL:EEG30685.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_098_000G1_scaffold_34_24
unknown

Not on your lists

comp(24157..24348)
DNA (192bp) protein (64aa)

This feature has no annotations

L3_098_000G1_scaffold_34_25
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25693..26154
DNA (462bp) protein (154aa)
acetyl-CoA carboxylase, biotin carboxyl carrier protein (EC:6.4.1.1)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=5 Tax=Erysipelotrichaceae RepID=B0N8E2_9FIRM
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EHM93764.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_098_000G1_scaffold_34_26
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26178..27530
DNA (1353bp) protein (451aa)
Acetyl-CoA carboxylase biotin carboxylase subunit n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5QYP1_9FIRM
Acetyl-CoA carboxylase biotin carboxylase subunit {ECO:0000313|EMBL:CCZ33553.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
acetyl-CoA carboxylase, biotin carboxylase subunit
L3_098_000G1_scaffold_34_27
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27531..28421
DNA (891bp) protein (297aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
acetyl-CoA carboxylase, carboxyl transferase subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=4 Tax=Erysipelotrichaceae RepID=B0N8E0_9FIRM
L3_098_000G1_scaffold_34_28
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28421..29371
DNA (951bp) protein (317aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=4 Tax=Erysipelotrichaceae RepID=B0N8D9_9FIRM
L3_098_000G1_scaffold_34_29
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29396..30352
DNA (957bp) protein (319aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GR98_9FIRM
3-oxoacyl-ACP synthase
L3_098_000G1_scaffold_34_30
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

30380..31336
DNA (957bp) protein (319aa)
Dioxygenases related to 2-nitropropane dioxygenase (EC:1.3.1.-)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=G9QXF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93770.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Displaying items 1-30 of 185 in total

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