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L3_098_000G1_scaffold_45

Search features with annotation key words

Displaying items 1-30 of 144 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000G1_scaffold_45_1
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(125..1372)
DNA (1248bp) protein (416aa)
Branched-chain amino acid transport system II carrier protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q872_9CLOT
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:EKY24168.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
brnQ; branched-chain amino acid transport system II carrier protein
L3_098_000G1_scaffold_45_2
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1625..2503
DNA (879bp) protein (293aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FXU6_9CLOT
L3_098_000G1_scaffold_45_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2663..3691)
DNA (1029bp) protein (343aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q9Z4_9CLOT
L3_098_000G1_scaffold_45_4
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3870..4034)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FYQ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB14156.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
hypothetical protein
L3_098_000G1_scaffold_45_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4215..5285)
DNA (1071bp) protein (357aa)
Spore germination protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q9N0_9CLOT
Spore germination protein {ECO:0000313|EMBL:EKY24425.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
spore germination protein
L3_098_000G1_scaffold_45_6
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5388..6806
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q8X8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY24424.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
GerA spore germination family protein
L3_098_000G1_scaffold_45_7
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6796..7920
DNA (1125bp) protein (375aa)
Germination protein, Ger(X)C family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q8Z4_9CLOT
Germination protein, Ger(X)C family {ECO:0000313|EMBL:EKY24423.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
spore germination protein
L3_098_000G1_scaffold_45_8
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8070..8300
DNA (231bp) protein (77aa)
Divergent AAA domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q937_9CLOT
Divergent AAA domain protein {ECO:0000313|EMBL:EKY24421.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
putative transcriptional regulator
L3_098_000G1_scaffold_45_9
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8463..8876
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q9M6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY24420.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_098_000G1_scaffold_45_10
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9106..10326
DNA (1221bp) protein (407aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Clostridium sp. CAG:221 RepID=R6GIW9_9CLOT
L3_098_000G1_scaffold_45_11
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10531..11223
DNA (693bp) protein (231aa)
Ser/Thr phosphatase family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q9L1_9CLOT
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EKY24415.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
phoshohydrolase
L3_098_000G1_scaffold_45_12
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11315..12109
DNA (795bp) protein (265aa)
Putative RelA/SpoT domain protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EXR2_9CLOT
Putative RelA/SpoT domain protein {ECO:0000313|EMBL:CDG01031.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L3_098_000G1_scaffold_45_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12233..12889
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q9Y3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY24412.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_098_000G1_scaffold_45_14
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12938..13270)
DNA (333bp) protein (111aa)
HesB-like selenoprotein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q930_9CLOT
HesB-like selenoprotein {ECO:0000313|EMBL:EKY24411.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
HesB-like selenofamily protein
L3_098_000G1_scaffold_45_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13621..14367
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q9K8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY24410.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ribosomal RNA adenine dimethylase family protein
L3_098_000G1_scaffold_45_16
unknown

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14560..14958
DNA (399bp) protein (133aa)

This feature has no annotations

L3_098_000G1_scaffold_45_17
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14987..17437)
DNA (2451bp) protein (817aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
leuS; leucine--tRNA ligase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q8V8_9CLOT
L3_098_000G1_scaffold_45_18
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18245..19453
DNA (1209bp) protein (403aa)
Nucleoside transporter, NupC family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q920_9CLOT
Nucleoside permease {ECO:0000256|RuleBase:RU362018}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
nucleoside transporter NupC
L3_098_000G1_scaffold_45_19
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19636..20343
DNA (708bp) protein (236aa)
Response regulator receiver domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q9K0_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EKY24400.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
two-component system response regulator
L3_098_000G1_scaffold_45_20
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20318..22615
DNA (2298bp) protein (766aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
Histidine kinase A domain protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FQ47_9CLOT
sensor histidine kinase
L3_098_000G1_scaffold_45_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22997..23539
DNA (543bp) protein (181aa)
Rubredoxin/rubrerythrin n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SV42_CLOPS
rubredoxin/rubrerythrin
Rubredoxin/rubrerythrin {ECO:0000313|EMBL:ABG86148.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_098_000G1_scaffold_45_22
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23821..25254
DNA (1434bp) protein (478aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
cls1; cardiolipin synthase Cls (EC:2.7.8.-)
Cardiolipin synthase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFG5_9CLOT
L3_098_000G1_scaffold_45_23
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25365..25496
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QER0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY26421.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_098_000G1_scaffold_45_24
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25874..26887
DNA (1014bp) protein (338aa)
aroF1; phospho-2-dehydro-3-deoxyheptonate aldolase AroF (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FLM8_9CLOT
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:CDB14183.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
L3_098_000G1_scaffold_45_25
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27106..28152
DNA (1047bp) protein (349aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EIP4_9CLOT
L3_098_000G1_scaffold_45_26
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28341..29636
DNA (1296bp) protein (432aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240549}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240533};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFG9_9CLOT
3-phosphoshikimate 1-carboxyvinyltransferase
L3_098_000G1_scaffold_45_27
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29614..30690
DNA (1077bp) protein (359aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
aroC; chorismate synthase AroC (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FYS9_9CLOT
L3_098_000G1_scaffold_45_28
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30897..32054
DNA (1158bp) protein (386aa)
pheA: P-protein (EC:5.4.99.5 4.2.1.51)
Chorismate mutase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEM5_9CLOT
Chorismate mutase {ECO:0000313|EMBL:EKY26428.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_098_000G1_scaffold_45_29
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32246..33061
DNA (816bp) protein (272aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
aroE1; shikimate dehydrogenase AroE (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEK7_9CLOT
L3_098_000G1_scaffold_45_30
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33084..33578
DNA (495bp) protein (165aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
Shikimate kinase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FXX6_9CLOT
shikimate kinase
Displaying items 1-30 of 144 in total

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