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L3_098_000G1_scaffold_48

Search features with annotation key words

Displaying items 1-30 of 311 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000G1_scaffold_48_1
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1..942
DNA (942bp) protein (314aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
alanine dehydrogenase n=1 Tax=Staphylococcus hominis RepID=UPI0003802E5B
ald; alanine dehydrogenase
L3_098_000G1_scaffold_48_2
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1032..2087)
DNA (1056bp) protein (352aa)
dipeptidase n=1 Tax=Staphylococcus hominis RepID=UPI0002E5620B
Proline dipeptidase {ECO:0000313|EMBL:EUZ70605.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
hypothetical protein
L3_098_000G1_scaffold_48_3
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2217..2906
DNA (690bp) protein (230aa)
UPF0173 metal-dependent hydrolase STAHO0001_1831 n=3 Tax=Staphylococcus hominis RepID=C2LYF1_STAHO
UPF0173 metal-dependent hydrolase O552_00511 {ECO:0000256|HAMAP-Rule:MF_00457}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
metal-dependent hydrolase
L3_098_000G1_scaffold_48_4
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2965..3378)
DNA (414bp) protein (138aa)
universal stress protein UspA n=1 Tax=Staphylococcus hominis RepID=UPI0003094357
Universal stress protein {ECO:0000313|EMBL:EUZ70603.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
uspA_2; universal stress protein
L3_098_000G1_scaffold_48_5
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3595..4893
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Staphylococcus hominis RepID=UPI0002E59598
CBS domain-containing protein {ECO:0000313|EMBL:EUZ70602.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
transcriptional regulator
L3_098_000G1_scaffold_48_6
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4924..5862
DNA (939bp) protein (313aa)
oligoribonuclease n=1 Tax=Staphylococcus hominis RepID=UPI0002F43251
Phosphoesterase RecJ domain-containing protein {ECO:0000313|EMBL:EUZ70601.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
exopolyphosphatase-like protein
L3_098_000G1_scaffold_48_7
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5883..9086
DNA (3204bp) protein (1068aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
DNA polymerase III subunit alpha n=1 Tax=Staphylococcus hominis RepID=UPI0002EC158E
dnaE; DNA polymerase III subunit alpha
L3_098_000G1_scaffold_48_8
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9285..9446
DNA (162bp) protein (54aa)
hypothetical protein n=1 Tax=Staphylococcus hominis RepID=UPI00030CA898
Uncharacterized protein {ECO:0000313|EMBL:EUZ70599.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
NADP-dependent malic enzyme
L3_098_000G1_scaffold_48_9
unknown

Not on your lists

9427..9561
DNA (135bp) protein (45aa)

This feature has no annotations

L3_098_000G1_scaffold_48_10
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9754..10620
DNA (867bp) protein (289aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
accB; acetyl-CoA carboxylase subunit beta (EC:6.4.1.2)
acetyl-CoA carboxylase subunit beta n=1 Tax=Staphylococcus hominis RepID=UPI0002DE16CE
L3_098_000G1_scaffold_48_11
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10613..11557
DNA (945bp) protein (315aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
acetyl-CoA carboxylase subunit alpha n=1 Tax=Staphylococcus hominis RepID=UPI00031F2554
L3_098_000G1_scaffold_48_12
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11693..12697
DNA (1005bp) protein (335aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
6-phosphofructokinase n=1 Tax=Staphylococcus hominis RepID=UPI0003137A81
pfkA; 6-phosphofructokinase
L3_098_000G1_scaffold_48_13
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12715..14475
DNA (1761bp) protein (587aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
pyruvate kinase n=1 Tax=Staphylococcus hominis RepID=UPI00031AC49B
pykA; pyruvate kinase
L3_098_000G1_scaffold_48_14
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14782..16134)
DNA (1353bp) protein (451aa)
alanine glycine permease n=1 Tax=Staphylococcus hominis RepID=UPI0002E512DF
D-serine/D-alanine/glycine transporter {ECO:0000313|EMBL:EUZ70594.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
D-serine/D-alanine/glycine transporter
L3_098_000G1_scaffold_48_15
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16442..17602
DNA (1161bp) protein (387aa)
citrate synthase n=1 Tax=Staphylococcus RepID=UPI000317B272
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
citZ; methylcitrate synthase
L3_098_000G1_scaffold_48_16
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17638..18909
DNA (1272bp) protein (424aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
isocitrate dehydrogenase n=1 Tax=Staphylococcus hominis RepID=UPI00030B5F79
citC; isocitrate dehydrogenase
L3_098_000G1_scaffold_48_17
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19134..19844
DNA (711bp) protein (237aa)
PhoP family transcriptional regulator n=1 Tax=Staphylococcus RepID=UPI0002E58A42
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP {ECO:0000313|EMBL:EUZ70591.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
phoP; alkaline phosphatase synthesis transcriptional regulatory protein
L3_098_000G1_scaffold_48_18
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19844..21541
DNA (1698bp) protein (566aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
sensor histidine kinase n=1 Tax=Staphylococcus hominis RepID=UPI0002F1B8B2
phoR; alkaline phosphatase synthesis sensor protein
L3_098_000G1_scaffold_48_19
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21722..24358
DNA (2637bp) protein (879aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
DNA polymerase I n=1 Tax=Staphylococcus hominis RepID=UPI00030CB7AC
polA; DNA polymerase I
L3_098_000G1_scaffold_48_20
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24374..25246
DNA (873bp) protein (291aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|SAAS:SAAS00020852}; EC=3.2.2.- {ECO:0000256|SAAS:SAAS00275239};; EC=3.2.2.23 {ECO:0000256|SAAS:SAAS00020832};; EC=4.2.99.18 {ECO:0000256|SAAS:SAAS00054019};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
formamidopyrimidine-DNA glycosylase n=1 Tax=Staphylococcus hominis RepID=UPI0002D8B8A7
hypothetical protein
L3_098_000G1_scaffold_48_21
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25268..25870
DNA (603bp) protein (201aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
dephospho-CoA kinase n=1 Tax=Staphylococcus hominis RepID=UPI0002FBF160
coaE; dephospho-CoA kinase
L3_098_000G1_scaffold_48_22
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26065..27090
DNA (1026bp) protein (342aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
glyceraldehyde 3-phosphate dehydrogenase 2 (EC:1.2.1.12)
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Staphylococcus hominis RepID=UPI00030CADE5
L3_098_000G1_scaffold_48_23
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27378..27848
DNA (471bp) protein (157aa)
NrdR family transcriptional regulator n=1 Tax=Staphylococcus hominis RepID=UPI0002E67C91
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
ribonucleotide reductase transcriptional regulator NrdR
L3_098_000G1_scaffold_48_24
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27849..29219
DNA (1371bp) protein (457aa)
chromosome replication protein DnaB n=1 Tax=Staphylococcus hominis RepID=UPI0002DD0A44
Replication initiation and membrane attachment protein {ECO:0000313|EMBL:EUZ70584.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
dnaB; chromosome replication initiation/membrane attachment protein
L3_098_000G1_scaffold_48_25
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29220..30140
DNA (921bp) protein (307aa)
primosomal protein DnaI n=1 Tax=Staphylococcus hominis RepID=UPI00031F8BE1
Primosomal protein DnaI {ECO:0000313|EMBL:EUZ70583.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
dnaI; primosomal protein DnaI
L3_098_000G1_scaffold_48_26
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30451..32388
DNA (1938bp) protein (646aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
threonyl-tRNA synthase n=1 Tax=Staphylococcus sp. MDS7B RepID=UPI000382AB5F
thrS; threonyl-tRNA synthetase
L3_098_000G1_scaffold_48_27
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32765..34258
DNA (1494bp) protein (498aa)
Amino acid permease n=3 Tax=Staphylococcus hominis RepID=C2LYC9_STAHO
Lysine-specific permease {ECO:0000313|EMBL:EUZ70581.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
lysP; lysine-specific permease
L3_098_000G1_scaffold_48_28
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

34427..34999
DNA (573bp) protein (191aa)
translation initiation factor IF-3 n=1 Tax=Staphylococcus hominis RepID=UPI00031FAAC4
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
infC; translation initiation factor IF-3
L3_098_000G1_scaffold_48_29
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


35027..35227
DNA (201bp) protein (67aa)
50S ribosomal protein L35 n=4 Tax=Staphylococcus RepID=RL35_STAHJ
rpmI; 50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=904802 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus CO-98.;"
L3_098_000G1_scaffold_48_30
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


35281..35637
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=3 Tax=Staphylococcus hominis RepID=C2LYC6_STAHO
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
rplT; 50S ribosomal protein L20
Displaying items 1-30 of 311 in total

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