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L3_098_000G1_scaffold_116

Search features with annotation key words

Displaying items 1-30 of 112 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000G1_scaffold_116_1
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(1..153)
DNA (153bp) protein (51aa)
gdhA; glutamate dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I408_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
L3_098_000G1_scaffold_116_2
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

506..715
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IF75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44001.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
L3_098_000G1_scaffold_116_3
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(731..2152)
DNA (1422bp) protein (474aa)
Xanthine/uracil permease family protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6J1C3_9FIRM
Xanthine/uracil permease family protein {ECO:0000313|EMBL:CDB44002.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
Permeases
L3_098_000G1_scaffold_116_4
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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comp(2317..2736)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I1J3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44003.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
hypothetical protein
L3_098_000G1_scaffold_116_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2802..3152)
DNA (351bp) protein (117aa)
Four helix bundle protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGB5_9FIRM
Four helix bundle protein {ECO:0000313|EMBL:EGJ45719.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_098_000G1_scaffold_116_6
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

3609..3851
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I416_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44005.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
L3_098_000G1_scaffold_116_7
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

3820..4137
DNA (318bp) protein (106aa)
Sigma-70 region 4 n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IF79_9FIRM
Sigma-70 region 4 {ECO:0000313|EMBL:CDB44006.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
L3_098_000G1_scaffold_116_8
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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4231..5055
DNA (825bp) protein (275aa)
Putative endolysin n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D8C8_9FIRM
Putative endolysin {ECO:0000313|EMBL:CCX72116.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
L3_098_000G1_scaffold_116_9
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

5218..6228
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I2W7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44488.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
hypothetical protein
L3_098_000G1_scaffold_116_10
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(6554..6721)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I1B9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB43070.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
L3_098_000G1_scaffold_116_11
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

6823..7596
DNA (774bp) protein (258aa)
Putative metallophosphoesterase n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6ICH6_9FIRM
Putative metallophosphoesterase {ECO:0000313|EMBL:CDB43071.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
hypothetical protein
L3_098_000G1_scaffold_116_12
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

7593..8699
DNA (1107bp) protein (369aa)
Ser/Thr phosphatase family protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IYN0_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CDB43072.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
putative hydrolase
L3_098_000G1_scaffold_116_13
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

8689..10593
DNA (1905bp) protein (635aa)
Putative collagen alpha-1(III) chain n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CWF1_9FIRM
Putative collagen alpha-1(III) chain {ECO:0000313|EMBL:CCX70884.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
hypothetical protein
L3_098_000G1_scaffold_116_14
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

10929..12281
DNA (1353bp) protein (451aa)
putative RNA methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CTF3_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CCX71113.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
L3_098_000G1_scaffold_116_15
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

12394..13023
DNA (630bp) protein (210aa)
Flavin reductase n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6HYU6_9FIRM
Flavin reductase {ECO:0000313|EMBL:CDB43063.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
Multimeric flavodoxin WrbA
L3_098_000G1_scaffold_116_16
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(13343..14707)
DNA (1365bp) protein (455aa)
Putative efflux protein MATE family n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IYM5_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CDB43062.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
putative efflux protein, MATE family
L3_098_000G1_scaffold_116_17
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

14725..16128
DNA (1404bp) protein (468aa)
Putative integral membrane protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6ICH0_9FIRM
Putative integral membrane protein {ECO:0000313|EMBL:CDB43061.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
hypothetical protein
L3_098_000G1_scaffold_116_18
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

16218..16454
DNA (237bp) protein (79aa)
Preprotein translocase SecG subunit n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I1B3_9FIRM
Preprotein translocase SecG subunit {ECO:0000313|EMBL:CDB43060.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
secG; preprotein translocase SecG subunit
L3_098_000G1_scaffold_116_19
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

16515..17213
DNA (699bp) protein (233aa)
Putative branched-chain amino acid transport protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I9C7_9FIRM
Putative branched-chain amino acid transport protein {ECO:0000313|EMBL:CDB43059.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
putative branched-chain amino acid transport protein
L3_098_000G1_scaffold_116_20
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

17210..17542
DNA (333bp) protein (111aa)
Branched-chain amino acid transporter n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6HYU4_9FIRM
Branched-chain amino acid transporter {ECO:0000313|EMBL:CDB43058.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
branched-chain amino acid permease
L3_098_000G1_scaffold_116_21
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

17670..19508
DNA (1839bp) protein (613aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
glmS; glucosamine-6-phosphate synthase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IYM0_9FIRM
L3_098_000G1_scaffold_116_22
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

19563..20849
DNA (1287bp) protein (429aa)
UDP-N-acetylmuramyl tripeptide synthase n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6ICG6_9FIRM
UDP-N-acetylmuramyl tripeptide synthase {ECO:0000313|EMBL:CDB43056.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
UDP-N-acetylmuramyl tripeptide ligase-like protein
L3_098_000G1_scaffold_116_23
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

20864..22132
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I1B1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB43055.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
conserved hypothetical protein
L3_098_000G1_scaffold_116_24
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

22129..22971
DNA (843bp) protein (281aa)
PHP domain protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I9C4_9FIRM
PHP domain protein {ECO:0000313|EMBL:CDB43054.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
phosphotransferase domain-containing protein
L3_098_000G1_scaffold_116_25
unknown

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23122..23214
DNA (93bp) protein (31aa)

This feature has no annotations

L3_098_000G1_scaffold_116_26
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(23275..24522)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IYL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB43052.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
Glycerol dehydrogenase and related enzymes
L3_098_000G1_scaffold_116_27
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(24663..25076)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6ICG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB43051.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
hypothetical protein
L3_098_000G1_scaffold_116_28
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(25218..26492)
DNA (1275bp) protein (425aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I1A7_9FIRM
L3_098_000G1_scaffold_116_29
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(26622..27767)
DNA (1146bp) protein (382aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I9C1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB43049.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
L3_098_000G1_scaffold_116_30
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

28061..29362
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6HYT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB43048.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
hypothetical protein
Displaying items 1-30 of 112 in total

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