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L3_098_000G1_scaffold_8749

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000G1_scaffold_8749_1
Shewanella sp. MR-7, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..109
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Shewanella sp. (strain MR-7) RepID=Q0HZQ7_SHESR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI41398.1}; TaxID=60481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. (strain MR-7).;"
L3_098_000G1_scaffold_8749_2
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

220..729
DNA (510bp) protein (170aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1095746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae HK2019.;"
Peptide deformylase n=3 Tax=Haemophilus parainfluenzae RepID=F0ERF6_HAEPA
peptide deformylase
L3_098_000G1_scaffold_8749_3
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

789..1745
DNA (957bp) protein (319aa)
fmt; 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet ) N-formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=862965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae (strain T3T1).;"
Methionyl-tRNA formyltransferase n=1 Tax=Haemophilus parainfluenzae (strain T3T1) RepID=E1W334_HAEP3
L3_098_000G1_scaffold_8749_4
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1745..3082
DNA (1338bp) protein (446aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=862965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae (strain T3T1).;"
16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent n=1 Tax=Haemophilus parainfluenzae (strain T3T1) RepID=E1W335_HAEP3
16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent
L3_098_000G1_scaffold_8749_5
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3083..3898
DNA (816bp) protein (272aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EGC72805.1}; EC=2.4.-.- {ECO:0000313|EMBL:EGC72805.1};; TaxID=888828 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae ATCC 33392.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Haemophilus parainfluenzae ATCC 33392 RepID=F0ERF9_HAEPA
hypothetical protein
L3_098_000G1_scaffold_8749_6
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3895..5271
DNA (1377bp) protein (459aa)
Potassium transporter peripheral membrane component n=3 Tax=Haemophilus parainfluenzae RepID=F0ERG0_HAEPA
Trk system potassium uptake protein TrkA {ECO:0000313|EMBL:EIJ29973.1}; TaxID=1095746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae HK2019.;"
NAD-binding component of TrK potassium transporter
L3_098_000G1_scaffold_8749_7
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5350..5736
DNA (387bp) protein (129aa)
Large-conductance mechanosensitive channel n=1 Tax=Haemophilus parainfluenzae (strain T3T1) RepID=E1W338_HAEP3
mechanosensitive channel
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=862965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae (strain T3T1).;"
L3_098_000G1_scaffold_8749_8
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5794..6270)
DNA (477bp) protein (159aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=888828 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae ATCC 33392.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Haemophilus parainfluenzae ATCC 33392 RepID=F0ERG2_HAEPA
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
L3_098_000G1_scaffold_8749_9
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6267..6950)
DNA (684bp) protein (228aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=888828 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae ATCC 33392.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Haemophilus parainfluenzae ATCC 33392 RepID=F0ERG3_HAEPA
4-diphosphocytidyl-2C-methyl-D-erythritol synthase
L3_098_000G1_scaffold_8749_10
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6950..7228)
DNA (279bp) protein (93aa)
Cell division protein FtsB n=1 Tax=Haemophilus parainfluenzae (strain T3T1) RepID=E1W341_HAEP3
cell division protein
Cell division protein FtsB {ECO:0000256|HAMAP-Rule:MF_00599, ECO:0000256|SAAS:SAAS00014481}; TaxID=862965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae (strain T3T1).;"
L3_098_000G1_scaffold_8749_11
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7479..8246
DNA (768bp) protein (256aa)
5'-nucleotidase, lipoprotein e(P4) family n=2 Tax=Haemophilus parainfluenzae RepID=I2J0N1_HAEPA
hypothetical protein
5'-nucleotidase, lipoprotein e(P4) family {ECO:0000313|EMBL:EIJ29923.1}; TaxID=1095746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae HK2019.;"
L3_098_000G1_scaffold_8749_12
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8313..8936)
DNA (624bp) protein (208aa)
DNA-binding transcriptional repressor n=1 Tax=Haemophilus parainfluenzae (strain T3T1) RepID=E1W343_HAEP3
DNA-binding transcriptional repressor
DNA-binding transcriptional repressor {ECO:0000313|EMBL:CBW14783.1}; TaxID=862965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae (strain T3T1).;"
L3_098_000G1_scaffold_8749_13
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8962..9867)
DNA (906bp) protein (302aa)
DNA-binding transcriptional dual regulator n=1 Tax=Haemophilus parainfluenzae (strain T3T1) RepID=E1W344_HAEP3
DNA-binding transcriptional dual regulator
DNA-binding transcriptional dual regulator {ECO:0000313|EMBL:CBW14784.1}; TaxID=862965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae (strain T3T1).;"
L3_098_000G1_scaffold_8749_14
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9999..10724
DNA (726bp) protein (242aa)
Glutaredoxin-family domain protein {ECO:0000313|EMBL:EGC72814.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EGC72814.1};; TaxID=888828 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae ATCC 33392.;"
Glutaredoxin-family domain protein n=1 Tax=Haemophilus parainfluenzae ATCC 33392 RepID=F0ERG8_HAEPA
hypothetical protein
L3_098_000G1_scaffold_8749_15
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10825..11142)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Haemophilus parainfluenzae (strain T3T1) RepID=E1W346_HAEP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW14786.1}; TaxID=862965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae (strain T3T1).;"
L3_098_000G1_scaffold_8749_16
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11192..11818
DNA (627bp) protein (209aa)
Peptidase, S54 family {ECO:0000313|EMBL:EIJ29994.1}; EC=3.4.21.- {ECO:0000313|EMBL:EIJ29994.1};; TaxID=1095746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae HK2019.;"
Peptidase, S54 family n=2 Tax=Haemophilus parainfluenzae RepID=I2J0Y6_HAEPA
hypothetical protein
L3_098_000G1_scaffold_8749_17
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11840..12595
DNA (756bp) protein (252aa)
Glycerol-3-phosphate regulon repressor n=2 Tax=Haemophilus parainfluenzae RepID=I2J0U0_HAEPA
Glycerol-3-phosphate regulon repressor {ECO:0000313|EMBL:EIJ29912.1}; TaxID=1095746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae HK2019.;"
DNA-binding transcriptional repressor
L3_098_000G1_scaffold_8749_18
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12553..12690)
DNA (138bp) protein (46aa)
Uncharacterized protein n=2 Tax=Haemophilus parainfluenzae RepID=I2J0N9_HAEPA
Uncharacterized protein {ECO:0000313|EMBL:EIJ30036.1}; TaxID=1095746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae HK2019.;"
hypothetical protein
L3_098_000G1_scaffold_8749_19
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13011..13487)
DNA (477bp) protein (159aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1095746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae HK2019.;"
tRNA (cytidine(34)-2'-O)-methyltransferase n=3 Tax=Haemophilus parainfluenzae RepID=F0ERH7_HAEPA
rRNA methylase
L3_098_000G1_scaffold_8749_20
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13497..14081)
DNA (585bp) protein (195aa)
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=888828 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae ATCC 33392.;"
RNA methyltransferase, RsmD family n=1 Tax=Haemophilus parainfluenzae ATCC 33392 RepID=F0ERH8_HAEPA
methyltransferase
L3_098_000G1_scaffold_8749_21
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14294..15484
DNA (1191bp) protein (397aa)
Signal recognition particle receptor FtsY n=1 Tax=Haemophilus parainfluenzae ATCC 33392 RepID=F0ERH9_HAEPA
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=888828 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae ATCC 33392.;"
Signal Recognition Particle (SRP) receptor: membrane binding protein/conserved protein
L3_098_000G1_scaffold_8749_22
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15499..16155
DNA (657bp) protein (219aa)
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EGC72826.1}; EC=3.6.3.- {ECO:0000313|EMBL:EGC72826.1};; TaxID=888828 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae ATCC 33392.;"
Cell division ATP-binding protein FtsE n=3 Tax=Haemophilus parainfluenzae RepID=F0ERI0_HAEPA
ABC transporter ATP-binding protein
L3_098_000G1_scaffold_8749_23
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16165..16563
DNA (399bp) protein (133aa)
Cell division protein FtsX n=2 Tax=Haemophilus parainfluenzae RepID=I2J0U4_HAEPA
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1095746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae HK2019.;"
ABC transporter membrane protein
L3_098_000G1_scaffold_8749_24
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16532..17002
DNA (471bp) protein (157aa)
Cell division protein FtsX n=1 Tax=Haemophilus parainfluenzae (strain T3T1) RepID=E1W354_HAEP3
ABC transporter membrane protein
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=862965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae (strain T3T1).;"
L3_098_000G1_scaffold_8749_25
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17321..17629
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=3 Tax=Haemophilus RepID=C9MA85_HAEIF
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=883125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5250.;"
Displaying 25 items

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