ggKbase home page

L3_098_000G1_scaffold_1049

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000G1_scaffold_1049_1
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..341
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R6AAT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA38197.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
Archaeal ATPase.
L3_098_000G1_scaffold_1049_2
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(349..1224)
DNA (876bp) protein (292aa)
AraC family transcriptional regulator L-rhamnose operon transcriptional activator RhaR n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZHF0_9FIRM
AraC family transcriptional regulator L-rhamnose operon transcriptional activator RhaR {ECO:0000313|EMBL:CDA38200.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
AraC family transcriptional regulator
L3_098_000G1_scaffold_1049_3
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1337..3616
DNA (2280bp) protein (760aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
Phosphorylase n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZUF7_9FIRM
starch phosphorylase
L3_098_000G1_scaffold_1049_4
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3709..5253
DNA (1545bp) protein (515aa)
Two-component system, response regulator YesN n=2 Tax=Eubacterium RepID=C4Z3B2_EUBE2
two-component system response regulator YesN
Two-component system, response regulator YesN {ECO:0000313|EMBL:ACR72702.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_098_000G1_scaffold_1049_5
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5250..7007
DNA (1758bp) protein (586aa)
Two-component system, sensor histidine kinase YesM n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z3B1_EUBE2
two-component system sensor histidine kinase YesM
Two-component system, sensor histidine kinase YesM {ECO:0000313|EMBL:ACR72701.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_098_000G1_scaffold_1049_6
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7121..8374
DNA (1254bp) protein (418aa)
Maltose/maltodextrin transport system substrate-binding protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZUG1_9FIRM
Maltose/maltodextrin transport system substrate-binding protein {ECO:0000313|EMBL:CDA38206.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
maltose/maltodextrin transport system substrate-binding protein
L3_098_000G1_scaffold_1049_7
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8411..9748
DNA (1338bp) protein (446aa)
Maltose/maltodextrin transport system permease protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZEG9_9FIRM
Maltose/maltodextrin transport system permease protein {ECO:0000313|EMBL:CDA38208.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
maltose/maltodextrin transport system permease
L3_098_000G1_scaffold_1049_8
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9745..10593
DNA (849bp) protein (283aa)
Maltose/maltodextrin transport system permease protein n=2 Tax=Eubacterium RepID=C4Z3A8_EUBE2
maltose/maltodextrin transport system permease
Maltose/maltodextrin transport system permease protein {ECO:0000313|EMBL:ACR72698.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_098_000G1_scaffold_1049_9
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10598..12298
DNA (1701bp) protein (567aa)
Multiple sugar transport system substrate-binding protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R6AAV3_9FIRM
Multiple sugar transport system substrate-binding protein {ECO:0000313|EMBL:CDA38212.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
sugar ABC transporter substrate-binding protein
L3_098_000G1_scaffold_1049_10
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12372..13838
DNA (1467bp) protein (489aa)
Transporter n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z3A6_EUBE2
neurotransmitter:Na+ symporter
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_098_000G1_scaffold_1049_11
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13842..14483
DNA (642bp) protein (214aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
Endonuclease III n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z3A5_EUBE2
DNA-(apurinic or apyrimidinic site) lyase
L3_098_000G1_scaffold_1049_12
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14558..15607
DNA (1050bp) protein (350aa)
Twitching motility protein PilT n=1 Tax=Eubacterium eligens CAG:72 RepID=R6AAV8_9FIRM
Twitching motility protein PilT {ECO:0000313|EMBL:CDA38217.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
twitching motility protein PilT
L3_098_000G1_scaffold_1049_13
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15762..17369
DNA (1608bp) protein (536aa)
Two-component system, PleD related family, response regulator n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z3A3_EUBE2
two-component system PleD-like family response regulator
Two-component system, PleD related family, response regulator {ECO:0000313|EMBL:ACR72693.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_098_000G1_scaffold_1049_14
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17373..19028
DNA (1656bp) protein (552aa)
ATP-dependent DNA helicase RecQ n=2 Tax=root RepID=R6AAW2_9FIRM
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:CDA38222.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
ATP-dependent DNA helicase RecQ
L3_098_000G1_scaffold_1049_15
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19071..19820
DNA (750bp) protein (250aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
tRNA pseudouridine synthase A n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZEH9_9FIRM
tRNA-pseudouridine synthase I
L3_098_000G1_scaffold_1049_16
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20559..21305)
DNA (747bp) protein (249aa)
Polar amino acid transport system ATP-binding protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZP11_9FIRM
Polar amino acid transport system ATP-binding protein {ECO:0000313|EMBL:CDA38224.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
polar amino acid transport system ATP-binding protein
L3_098_000G1_scaffold_1049_17
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21295..22782)
DNA (1488bp) protein (496aa)
Polar amino acid transport system permease protein n=2 Tax=root RepID=R5ZHH0_9FIRM
Polar amino acid transport system permease protein {ECO:0000313|EMBL:CDA38225.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
polar amino acid transport system permease
L3_098_000G1_scaffold_1049_18
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23165..24166)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZUH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA38226.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
hypothetical protein
L3_098_000G1_scaffold_1049_19
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24258..24974
DNA (717bp) protein (239aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C4Z396_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR72686.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_098_000G1_scaffold_1049_20
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25027..25560
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z395_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR72685.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_098_000G1_scaffold_1049_21
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25654..26841
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZUI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA38231.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
hypothetical protein
L3_098_000G1_scaffold_1049_22
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26858..28600
DNA (1743bp) protein (581aa)
ATP-binding cassette, subfamily C, bacterial n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z393_EUBE2
ATP-binding cassette, subfamily C, bacterial {ECO:0000313|EMBL:ACR72683.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
ATP-binding cassette subfamily C protein
L3_098_000G1_scaffold_1049_23
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28600..30351
DNA (1752bp) protein (584aa)
ATP-binding cassette subfamily B bacterial n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZP21_9FIRM
ATP-binding cassette subfamily B bacterial {ECO:0000313|EMBL:CDA38234.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
ATP-binding cassette subfamily B protein
L3_098_000G1_scaffold_1049_24
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30367..31050
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZEI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA38238.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
hypothetical protein
L3_098_000G1_scaffold_1049_25
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31069..32349
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZP26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA38239.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
hypothetical protein
L3_098_000G1_scaffold_1049_26
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32349..33398
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZHI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA38240.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
hypothetical protein
Displaying 26 items

View Taxonomy