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L3_098_000G1_scaffold_3216

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000G1_scaffold_3216_1
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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182..451
DNA (270bp) protein (90aa)
Uncharacterized protein n=2 Tax=Propionibacterium granulosum RepID=U1FFZ6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERF66842.1}; TaxID=1292373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum TM11.;"
L3_098_000G1_scaffold_3216_2
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(486..1415)
DNA (930bp) protein (310aa)
Polyphosphate kinase 2 n=2 Tax=Propionibacterium granulosum RepID=U1G535_9ACTO
Polyphosphate kinase 2 {ECO:0000313|EMBL:ERF58155.1}; TaxID=1160719 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum DSM 20700.;"
polyphosphate kinase 2
L3_098_000G1_scaffold_3216_3
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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1668..2237
DNA (570bp) protein (190aa)
Elongation factor P n=3 Tax=Propionibacterium RepID=U1FG16_9ACTO
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1292373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum TM11.;"
elongation factor P
L3_098_000G1_scaffold_3216_4
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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2234..2983
DNA (750bp) protein (250aa)
N utilization substance protein B homolog n=1 Tax=Propionibacterium granulosum DSM 20700 RepID=U1GJA3_9ACTO
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1160719 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum DSM 20700.;"
nusB; transcription antitermination factor NusB
L3_098_000G1_scaffold_3216_5
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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3225..3548
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Propionibacterium granulosum RepID=U1G465_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERF66838.1}; TaxID=1292373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum TM11.;"
hypothetical protein
L3_098_000G1_scaffold_3216_6
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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3641..4252
DNA (612bp) protein (204aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1292373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum TM11.;"
Guanylate kinase n=2 Tax=Propionibacterium granulosum RepID=U1FQ82_9ACTO
guanylate kinase
L3_098_000G1_scaffold_3216_7
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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4274..4657
DNA (384bp) protein (128aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1292373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum TM11.;"
DNA-directed RNA polymerase subunit omega n=2 Tax=Propionibacterium granulosum RepID=U1F2N1_9ACTO
guanylate kinase
L3_098_000G1_scaffold_3216_8
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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4771..6000
DNA (1230bp) protein (410aa)
Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase n=2 Tax=Propionibacterium granulosum RepID=U1FG13_9ACTO
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:ERF66835.1}; TaxID=1292373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum TM11.;"
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
L3_098_000G1_scaffold_3216_9
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6063..7256
DNA (1194bp) protein (398aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1292373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum TM11.;"
metK; S-adenosylmethionine synthase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Propionibacterium granulosum TM11 RepID=U1HDB8_9ACTO
L3_098_000G1_scaffold_3216_10
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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7359..7934
DNA (576bp) protein (192aa)
Putative DNA polymerase III epsilon subunit (Exonuclease) n=1 Tax=Propionibacterium granulosum DSM 20700 RepID=U1GN88_9ACTO
Putative DNA polymerase III epsilon subunit (Exonuclease) {ECO:0000313|EMBL:ERF58174.1}; TaxID=1160719 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum DSM 20700.;"
putative DNA polymerase III epsilon subunit (exonuclease)
L3_098_000G1_scaffold_3216_11
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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8057..9535
DNA (1479bp) protein (493aa)
Succinate-semialdehyde dehydrogenase (Fragment) n=1 Tax=Propionibacterium granulosum TM11 RepID=U1HA44_9ACTO
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ERF66900.1}; Flags: Fragment;; TaxID=1292373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum TM11.;"
aldehyde dehydrogenase
L3_098_000G1_scaffold_3216_12
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9544..11709
DNA (2166bp) protein (722aa)
Probable primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1292373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum TM11.;"
primosomal protein (EC:3.6.1.-)
Putative primosomal protein N n=1 Tax=Propionibacterium granulosum TM11 RepID=U1HDH9_9ACTO
L3_098_000G1_scaffold_3216_13
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11718..12833
DNA (1116bp) protein (372aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1160719 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum DSM 20700.;"
Methionyl-tRNA formyltransferase n=1 Tax=Propionibacterium granulosum DSM 20700 RepID=U1FG09_9ACTO
methionyl-tRNA formyltransferase
L3_098_000G1_scaffold_3216_14
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12830..14236
DNA (1407bp) protein (469aa)
tRNA/rRNA cytosine-C5-methylase (EC:2.1.1.-)
Putative ribosomal RNA small subunit methyltransferase B n=1 Tax=Propionibacterium granulosum DSM 20700 RepID=U1GJ94_9ACTO
Putative ribosomal RNA small subunit methyltransferase B {ECO:0000313|EMBL:ERF58170.1}; TaxID=1160719 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum DSM 20700.;"
L3_098_000G1_scaffold_3216_15
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14321..14983
DNA (663bp) protein (221aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1292373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum TM11.;"
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=2 Tax=Propionibacterium granulosum RepID=U1FQT9_9ACTO
L3_098_000G1_scaffold_3216_16
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15054..15374)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Propionibacterium sp. KPL1844 RepID=U7JHR4_9ACTO
PAC2 domain-containing protein {ECO:0000313|EMBL:ERF67051.1}; TaxID=1292373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum TM11.;"
PAC2 domain-containing protein
Displaying 16 items

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