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L3_098_000G1_scaffold_3789

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000G1_scaffold_3789_1
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..598)
DNA (597bp) protein (199aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1160719 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum DSM 20700.;"
Peptidyl-tRNA hydrolase n=2 Tax=Propionibacterium granulosum RepID=U1FHV6_9ACTO
aminoacyl-tRNA hydrolase
L3_098_000G1_scaffold_3789_2
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(595..1200)
DNA (606bp) protein (202aa)
50S ribosomal protein L25 n=2 Tax=Propionibacterium granulosum RepID=U1FVU1_9ACTO
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1160719 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum DSM 20700.;"
50S ribosomal protein L25/general stress protein Ctc
L3_098_000G1_scaffold_3789_3
Propionibacterium sp. KPL1844, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1467..2435)
DNA (969bp) protein (323aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1203573 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KPL1844.;"
Ribose-phosphate pyrophosphokinase n=3 Tax=Propionibacterium RepID=U1F756_9ACTO
Ribose-phosphate pyrophosphokinase
L3_098_000G1_scaffold_3789_4
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2432..3724)
DNA (1293bp) protein (431aa)
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase (EC:2.3.1.157)
Bifunctional protein GlmU n=2 Tax=Propionibacterium granulosum RepID=U1EU44_9ACTO
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1292373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum TM11.;"
L3_098_000G1_scaffold_3789_5
unknown

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comp(3828..3920)
DNA (93bp) protein (31aa)

This feature has no annotations

L3_098_000G1_scaffold_3789_6
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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4284..4958
DNA (675bp) protein (225aa)
Transcriptional regulator, TetR family protein n=2 Tax=Propionibacterium granulosum RepID=U1F8A8_9ACTO
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:ERF64001.1}; TaxID=1292373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum TM11.;"
TetR family transcriptional regulator
L3_098_000G1_scaffold_3789_7
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4909..5469)
DNA (561bp) protein (187aa)
MarR family transcriptional regulator n=1 Tax=Propionibacterium granulosum DSM 20700 RepID=U1GA68_9ACTO
MarR family transcriptional regulator {ECO:0000313|EMBL:ERF55225.1}; TaxID=1160719 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum DSM 20700.;"
marR family transcriptional regulator
L3_098_000G1_scaffold_3789_8
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5466..6425)
DNA (960bp) protein (320aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1292373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum TM11.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=2 Tax=Propionibacterium granulosum RepID=U1FVU6_9ACTO
L3_098_000G1_scaffold_3789_9
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6500..7390)
DNA (891bp) protein (297aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1292373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum TM11.;"
ribosomal RNA small subunit methyltransferase A (EC:2.1.1.182)
Ribosomal RNA small subunit methyltransferase A n=3 Tax=Propionibacterium granulosum RepID=U1H5D2_9ACTO
L3_098_000G1_scaffold_3789_10
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7387..8307)
DNA (921bp) protein (307aa)
hydrolase, TatD family (EC:3.1.21.-)
DNase n=1 Tax=Propionibacterium granulosum DSM 20700 RepID=U1GE59_9ACTO
DNase {ECO:0000313|EMBL:ERF55244.1}; TaxID=1160719 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum DSM 20700.;"
L3_098_000G1_scaffold_3789_11
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8363..9250)
DNA (888bp) protein (296aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1160719 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum DSM 20700.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Propionibacterium granulosum DSM 20700 RepID=U1F766_9ACTO
S-adenosylmethionine-dependent methyltransferase, YraL family protein
L3_098_000G1_scaffold_3789_12
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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9379..10908
DNA (1530bp) protein (510aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase n=2 Tax=Propionibacterium granulosum RepID=U1FHW6_9ACTO
Dolichyl-phosphate-mannose-protein mannosyltransferase {ECO:0000313|EMBL:ERF64007.1}; TaxID=1292373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum TM11.;"
Dolichyl-phosphate-mannose-protein mannosyltransferase
L3_098_000G1_scaffold_3789_13
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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11030..12508
DNA (1479bp) protein (493aa)
Uracil-xanthine permease n=1 Tax=Propionibacterium granulosum DSM 20700 RepID=U1GAA1_9ACTO
Uracil-xanthine permease {ECO:0000313|EMBL:ERF55260.1}; TaxID=1160719 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum DSM 20700.;"
uracil-xanthine permease
L3_098_000G1_scaffold_3789_14
Propionibacterium granulosum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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12604..13692
DNA (1089bp) protein (363aa)
Mg2+/Co2+ transporter n=3 Tax=Propionibacterium RepID=U1GE73_9ACTO
Mg2+/Co2+ transporter {ECO:0000313|EMBL:ERF55259.1}; TaxID=1160719 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium granulosum DSM 20700.;"
Mg2+/Co2+ transporter
Displaying 14 items

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