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L3_098_000G1_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 283 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000G1_scaffold_5_1
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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281..967
DNA (687bp) protein (229aa)
VTC domain-containing protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FJ59_9CLOT
VTC domain-containing protein {ECO:0000313|EMBL:EMS72130.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
hypothetical protein
L3_098_000G1_scaffold_5_2
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1007..1702
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TE82_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KIE46339.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L3_098_000G1_scaffold_5_3
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1717..3660
DNA (1944bp) protein (648aa)
Spore coat protein CotH n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I558_CLOCE
spore coat protein CotH
Spore coat protein CotH {ECO:0000313|EMBL:ACL74638.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
L3_098_000G1_scaffold_5_4
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3746..4516)
DNA (771bp) protein (257aa)
Shikimate kinase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RUA4_9CLOT
Shikimate kinase {ECO:0000313|EMBL:CCZ42154.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
shikimate dehydrogenase
L3_098_000G1_scaffold_5_5
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4709..5671
DNA (963bp) protein (321aa)
Stage III sporulation protein AA n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TT93_9CLOT
Stage III sporulation protein AA {ECO:0000313|EMBL:EXG88322.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
stage III sporulation protein AA
L3_098_000G1_scaffold_5_6
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5782..6303
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KMD0_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX42884.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_5_7
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6342..6536
DNA (195bp) protein (65aa)
Stage III sporulation protein AC (Fragment) n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C3R3_9CLOT
Stage III sporulation protein AC {ECO:0000313|EMBL:EEG73162.1}; Flags: Fragment;; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
stage III sporulation protein AC
L3_098_000G1_scaffold_5_8
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6594..6974
DNA (381bp) protein (127aa)
Stage III sporulation protein AD n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KMC8_CLOPH
stage III sporulation protein AD
Stage III sporulation protein AD {ECO:0000313|EMBL:ABX42882.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_5_9
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7066..8238
DNA (1173bp) protein (391aa)
Sporulation stage III, protein AE n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KMC7_CLOPH
sporulation stage III, protein AE
Sporulation stage III, protein AE {ECO:0000313|EMBL:ABX42881.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_5_10
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8289..8927
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KMC6_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX42880.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_5_11
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8942..9517
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KMC5_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX42879.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_5_12
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9527..10303
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:230 RepID=R6E678_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA85742.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
hypothetical protein
L3_098_000G1_scaffold_5_13
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10457..10834
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7I622_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE47284.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
hypothetical protein
L3_098_000G1_scaffold_5_14
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10957..11352
DNA (396bp) protein (132aa)
N utilization substance protein B homolog n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=NUSB_CLOPH
NusB antitermination factor
N utilization substance protein B homolog {ECO:0000255|HAMAP-Rule:MF_00073}; Short=Protein NusB {ECO:0000255|HAMAP-Rule:MF_00073};; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_5_15
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11410..12618
DNA (1209bp) protein (403aa)
exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit {ECO:0000255|HAMAP-Rule:MF_00378}; EC=3.1.11.6 {ECO:0000255|HAMAP-Rule:MF_00378};; Exodeoxyribonuclease VII large subunit {ECO:0000255|HAMAP-Rule:MF_00378}; Short=Exonuclease VII large subunit {ECO:0000255|HAMAP-Rule:MF_00378};; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=EX7L_CLOPH
L3_098_000G1_scaffold_5_16
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12618..12824
DNA (207bp) protein (69aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HEL3_9FIRM
hypothetical protein
L3_098_000G1_scaffold_5_17
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12814..13758
DNA (945bp) protein (315aa)
Geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2Y5F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG90251.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_098_000G1_scaffold_5_18
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13758..15674
DNA (1917bp) protein (639aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00315}; EC=2.2.1.7 {ECO:0000255|HAMAP-Rule:MF_00315};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00315}; Short=DXP synthase {ECO:0000255|HAMAP-Rule:MF_00315};; Short=DXPS {ECO:0000255|HAMAP-Rule:MF_00315};; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=DXS_CLOPH
deoxyxylulose-5-phosphate synthase
L3_098_000G1_scaffold_5_19
Clostridium sp. CAG:253, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15690..16583
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:253 RepID=R6LS73_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB88780.1}; TaxID=1262785 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:253.;"
hemolysin A
L3_098_000G1_scaffold_5_20
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16611..17465
DNA (855bp) protein (285aa)
NAD kinase {ECO:0000255|HAMAP-Rule:MF_00361}; EC=2.7.1.23 {ECO:0000255|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000255|HAMAP-Rule:MF_00361}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=PPNK_CLOPH
ATP-NAD/AcoX kinase
L3_098_000G1_scaffold_5_21
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17500..17970
DNA (471bp) protein (157aa)
Arginine repressor n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=ARGR_CLOPH
arginine repressor ArgR
Arginine repressor {ECO:0000255|HAMAP-Rule:MF_00173}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_5_22
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18106..18834
DNA (729bp) protein (243aa)
Probable transcriptional regulatory protein C805_01487 n=1 Tax=Eubacterium sp. 14-2 RepID=S0J3K4_9FIRM
Probable transcriptional regulatory protein C805_01487 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
conserved hypothetical protein TIGR01033
L3_098_000G1_scaffold_5_23
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19142..19555
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KLZ2_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX41335.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_5_24
unknown

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20080..20745
DNA (666bp) protein (222aa)

This feature has no annotations

L3_098_000G1_scaffold_5_25
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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21168..22517
DNA (1350bp) protein (450aa)
YceG family protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IBX7_9FIRM
YceG family protein {ECO:0000313|EMBL:CDB42916.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_098_000G1_scaffold_5_26
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22574..23806
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YYA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36334.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L3_098_000G1_scaffold_5_27
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23925..24530
DNA (606bp) protein (202aa)
Di-trans,poly-cis-decaprenylcistransferase (EC:2.5.1.31)
Di-trans,poly-cis-decaprenylcistransferase n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KZD5_9FIRM
Di-trans,poly-cis-decaprenylcistransferase {ECO:0000313|EMBL:EOS51581.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
L3_098_000G1_scaffold_5_28
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

24581..25549
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GYY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29735.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_098_000G1_scaffold_5_29
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25808..29692
DNA (3885bp) protein (1295aa)
Ig domain protein group 2 domain protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KMA7_CLOPH
Ig domain-containing protein
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:ABX42861.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_5_30
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29893..30870
DNA (978bp) protein (326aa)
Putative membrane protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NIL3_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CCZ03588.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical protein
Displaying items 1-30 of 283 in total

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