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L3_098_000G1_scaffold_225

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000G1_scaffold_225_1
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(285..2909)
DNA (2625bp) protein (875aa)
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:ADL03534.1}; EC=2.7.9.1 {ECO:0000313|EMBL:ADL03534.1};; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R6M8_CLOSW
L3_098_000G1_scaffold_225_2
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3628..5004)
DNA (1377bp) protein (459aa)
Glycine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00253}; EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00253};; Glycyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00253}; Short=GlyRS {ECO:0000255|HAMAP-Rule:MF_00253};; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
Glycine--tRNA ligase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=SYG_CLOPH
glycyl-tRNA synthetase
L3_098_000G1_scaffold_225_3
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5159..5767)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7HZ74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE44660.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
hypothetical protein
L3_098_000G1_scaffold_225_4
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5844..6584)
DNA (741bp) protein (247aa)
DNA repair protein RecO n=2 Tax=unclassified Lachnospiraceae RepID=E9RVU5_9FIRM
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
DNA repair protein RecO
L3_098_000G1_scaffold_225_5
unknown

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comp(6529..6720)
DNA (192bp) protein (64aa)

This feature has no annotations

L3_098_000G1_scaffold_225_6
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6852..7799)
DNA (948bp) protein (316aa)
GTPase Era n=1 Tax=Clostridium sp. CAG:411 RepID=R7I0A9_9CLOT
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
GTP-binding protein Era
L3_098_000G1_scaffold_225_7
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7942..10884)
DNA (2943bp) protein (981aa)
Peptidase M16C associated domain protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KJ33_CLOPH
peptidase M16C associated domain-containing protein
Peptidase M16C associated domain protein {ECO:0000313|EMBL:ABX41032.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_225_8
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11294..11494
DNA (201bp) protein (67aa)
Cold-shock DNA-binding domain protein n=1 Tax=Clostridium sp. CAG:167 RepID=R5VR39_9CLOT
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:CCZ90299.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
cold-shock DNA-binding domain-containing protein
L3_098_000G1_scaffold_225_9
unknown

Not on your lists

comp(11594..11764)
DNA (171bp) protein (57aa)

This feature has no annotations

L3_098_000G1_scaffold_225_10
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11793..12389)
DNA (597bp) protein (199aa)
Accessory gene regulator protein B {ECO:0000313|EMBL:CEN31387.1}; EC=3.4.-.- {ECO:0000313|EMBL:CEN31387.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Accessory gene regulator B n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6C7X0_9FIRM
Putative agrB-like protein
L3_098_000G1_scaffold_225_11
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12413..12604)
DNA (192bp) protein (64aa)
Uncharacterized protein n=2 Tax=Paenibacillus mucilaginosus RepID=H6NHZ2_9BACL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFC30763.1}; TaxID=1116391 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus 3016.;"
L3_098_000G1_scaffold_225_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12627..13379)
DNA (753bp) protein (251aa)
membrane protein n=1 Tax=Clostridium arbusti RepID=UPI0002898293
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKN42034.1}; TaxID=1232189 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CFSAN001627.;"
L3_098_000G1_scaffold_225_13
Enterococcus malodoratus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13363..14292)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Enterococcus malodoratus ATCC 43197 RepID=R2RTU6_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOH79369.1}; TaxID=1158601 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus malodoratus ATCC 43197.;"
bacitracin ABC transporter ATP-binding protein
L3_098_000G1_scaffold_225_14
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14285..15487)
DNA (1203bp) protein (401aa)
Peptidase M50 n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SMX0_CLOC7
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:ADL51836.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_098_000G1_scaffold_225_15
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15480..16838)
DNA (1359bp) protein (453aa)
Radical SAM domain protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JH38_CELLD
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:ADZ81853.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_098_000G1_scaffold_225_16
unknown

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comp(16985..17146)
DNA (162bp) protein (54aa)

This feature has no annotations

L3_098_000G1_scaffold_225_17
unknown

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comp(17192..17335)
DNA (144bp) protein (48aa)

This feature has no annotations

L3_098_000G1_scaffold_225_18
unknown

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comp(17363..17545)
DNA (183bp) protein (61aa)

This feature has no annotations

L3_098_000G1_scaffold_225_19
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17877..18593)
DNA (717bp) protein (239aa)
Response regulator of the LytR/AlgR family n=1 Tax=Roseburia sp. CAG:182 RepID=R7R0Q6_9FIRM
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CDF43473.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
Response regulator of the LytR/AlgR family
L3_098_000G1_scaffold_225_20
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18636..19991)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QY39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF43472.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
signal transduction histidine kinase regulating citrate/malate metabolism
L3_098_000G1_scaffold_225_21
unknown

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comp(20010..20633)
DNA (624bp) protein (208aa)

This feature has no annotations

L3_098_000G1_scaffold_225_22
Paenibacillus sp. FSL R5-0912, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21188..23017)
DNA (1830bp) protein (610aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI00036BFD32
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ41709.1}; TaxID=1536771 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-0912.;"
L3_098_000G1_scaffold_225_23
Paenibacillus sp. FSL R7-0273, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23094..23858)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI0003774AD9
multidrug ABC transporter ATP-binding protein
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIQ47438.1}; TaxID=1536772 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-0273.;"
L3_098_000G1_scaffold_225_24
Paenibacillus sp. FSL R5-0912, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23981..25033)
DNA (1053bp) protein (351aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1536771 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-0912.;"
Sensory transduction histidine kinase (HisKA and HATPase damains) n=3 Tax=Clostridium acetobutylicum RepID=F0K500_CLOAE
hypothetical protein
L3_098_000G1_scaffold_225_25
Paenibacillus sp. FSL R7-0273, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25107..25808)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI000377EFEB
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AIQ47436.1}; TaxID=1536772 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-0273.;"
L3_098_000G1_scaffold_225_26
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25953..27206)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KBG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN40024.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
condensation domain-containing protein
L3_098_000G1_scaffold_225_27
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27241..28005)
DNA (765bp) protein (255aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KS84_CLOPH
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABX42116.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_225_28
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28010..28615)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G6Z6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW06302.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_098_000G1_scaffold_225_29
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28883..30436)
DNA (1554bp) protein (518aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KJ31_CLOPH
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_225_30
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30963..32009)
DNA (1047bp) protein (349aa)
Acetyltransferase family protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FP05_9FIRM
acetyltransferase
Tax=BJP_IG2069_Clostridiales_48_15
Displaying items 1-30 of 69 in total

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