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L3_098_000G1_scaffold_318

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000G1_scaffold_318_1
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(239..955)
DNA (717bp) protein (239aa)
Probable GTP-binding protein EngB n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=ENGB_CLOPH
GTP-binding protein HSR1-related
Probable GTP-binding protein EngB {ECO:0000255|HAMAP-Rule:MF_00321}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_318_2
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1096..3414)
DNA (2319bp) protein (773aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Lon protease n=1 Tax=Roseburia sp. CAG:45 RepID=R6NKQ2_9FIRM
ATP-dependent protease La
L3_098_000G1_scaffold_318_3
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3617..4909)
DNA (1293bp) protein (431aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=CLPX_CLOPH
clpX; ATP-dependent protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000255|HAMAP-Rule:MF_00175}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_318_4
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5003..5587)
DNA (585bp) protein (195aa)
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KSX0_CLOPH
L3_098_000G1_scaffold_318_5
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5849..7267)
DNA (1419bp) protein (473aa)
Trigger factor {ECO:0000255|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000255|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000255|HAMAP-Rule:MF_00303};; PPIase {ECO:0000255|HAMAP-Rule:MF_00303}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
Trigger factor n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=TIG_CLOPH
trigger factor
L3_098_000G1_scaffold_318_6
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7469..8872)
DNA (1404bp) protein (468aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Phosphoglucosamine mutase n=1 Tax=Roseburia sp. CAG:380 RepID=R6VE49_9FIRM
phosphoglucosamine mutase
L3_098_000G1_scaffold_318_7
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9308..9529)
DNA (222bp) protein (74aa)
Small acid-soluble spore protein alpha/beta type n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KSW7_CLOPH
small acid-soluble spore protein alpha/beta type
Small acid-soluble spore protein alpha/beta type {ECO:0000313|EMBL:ABX40761.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_318_8
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10080..11399
DNA (1320bp) protein (440aa)
Amino acid carrier protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KBG3_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:EGN40027.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
amino acid carrier protein
L3_098_000G1_scaffold_318_9
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

comp(11396..11941)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N7K8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF08077.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
DJ-1 family protein
L3_098_000G1_scaffold_318_10
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12383..13993
DNA (1611bp) protein (537aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z158_9FIRM
L3_098_000G1_scaffold_318_11
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14195..14719)
DNA (525bp) protein (175aa)
Acetyltransferase, GNAT family n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0K155_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EQB27783.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
GCN5-related N-acetyltransferase
L3_098_000G1_scaffold_318_12
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14835..16781)
DNA (1947bp) protein (649aa)
beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase BgaA; Short=Beta-gal {ECO:0000250|UniProtKB:P19668};; EC=3.2.1.23;; Alpha-L-arabinopyranosidase {ECO:0000303|PubMed:12446636}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
Beta-galactosidase BgaA n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=BGAL_CLOC7
L3_098_000G1_scaffold_318_13
Carnobacterium maltaromaticum, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17200..17787)
DNA (588bp) protein (196aa)
flavodoxin-like fold family protein (EC:1.6.99.-)
Flavodoxin-like fold family protein {ECO:0000313|EMBL:CCO12334.2}; EC=1.6.99.- {ECO:0000313|EMBL:CCO12334.2};; TaxID=1234679 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Carnobacterium maltaromaticum LMA28.;"
Flavodoxin-like fold family protein n=1 Tax=Carnobacterium maltaromaticum LMA28 RepID=K8E6C8_CARML
L3_098_000G1_scaffold_318_14
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17997..19880
DNA (1884bp) protein (628aa)
Peptidase, U32 family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q5K9_9CLOT
Peptidase, U32 family {ECO:0000313|EMBL:EKY23258.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
peptidase U32
L3_098_000G1_scaffold_318_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19892..21121
DNA (1230bp) protein (410aa)
Aminotransferase, class III n=2 Tax=Turicibacter RepID=D4W4I4_9FIRM
Aminotransferase class III {ECO:0000313|EMBL:KJU72802.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
aminotransferase class-III family protein
L3_098_000G1_scaffold_318_16
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21346..21858)
DNA (513bp) protein (171aa)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VTH9_THESW
N-acetyl-gamma-glutamyl-phosphate reductase
Tax=BJP_IG2069_Clostridiales_42_11
L3_098_000G1_scaffold_318_17
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21801..22406)
DNA (606bp) protein (202aa)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KCB0_9GAMM
N-acetyl-gamma-glutamyl-phosphate reductase, common form
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
L3_098_000G1_scaffold_318_18
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23200..23982)
DNA (783bp) protein (261aa)
Polysaccharide deacetylase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KIY9_CLOPH
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ABX40988.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_318_19
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24655..25029)
DNA (375bp) protein (125aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
panD; aspartate alpha-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IN96_9FIRM
L3_098_000G1_scaffold_318_20
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25049..25225)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AM33_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI66899.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
putative acetyltransferase
L3_098_000G1_scaffold_318_21
Onchocerca volvulus, Onchocerca, Spirurida, Chromadorea, Nematoda, Metazoa

Not on your lists

comp(25279..26331)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037FA65A
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:OVOC1562}; TaxID=6282 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Spirurida; Filarioidea; Onchocercidae; Onchocerca.;" source="Onchocerca volvulus.;"
protein of unknown function DUF81
L3_098_000G1_scaffold_318_22
RBG_13_Spirochaetes_51_14_curated, Spirochaetes, Bacteria

Not on your lists

comp(26291..28015)
DNA (1725bp) protein (575aa)
acyl-CoA synthetase (EC:6.2.1.-)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CAI3_9BACT
Tax=RBG_13_Spirochaetes_51_14_curated
L3_098_000G1_scaffold_318_23

Not on your lists

comp(28018..29472)
DNA (1455bp) protein (485aa)
Marine sediment metagenome DNA, contig: S03H2_C00767 {ECO:0000313|EMBL:GAH24680.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Radical SAM domain protein id=4377794 bin=GWF2_Lentisphaerae_49_21 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Fe-S oxidoreductase
L3_098_000G1_scaffold_318_24
Petrotoga mobilis, Petrotoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(29502..30839)
DNA (1338bp) protein (446aa)
Coenzyme F390 synthetase n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BEU7_PETMO
coenzyme F390 synthetase
Coenzyme F390 synthetase {ECO:0000313|EMBL:ABX30825.1}; TaxID=403833 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Petrotoga.;" source="Petrotoga mobilis (strain DSM 10674 / SJ95).;"
L3_098_000G1_scaffold_318_25
Geobacillus stearothermophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30855..32318)
DNA (1464bp) protein (488aa)
Aldehyde dehydrogenase n=2 Tax=Bacillus mycoides RepID=C3AJ98_BACMY
Betaine aldehyde dehydrogenase {ECO:0000313|EMBL:EZP75769.1}; TaxID=1295642 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus stearothermophilus NUB3621.;"
aldehyde dehydrogenase family protein
L3_098_000G1_scaffold_318_26
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32333..32761)
DNA (429bp) protein (143aa)
3-hydroxyacyl-(acyl-carrier-protein) dehydratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium.;" source="Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288).;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QTV7_ACEAZ
L3_098_000G1_scaffold_318_27
delta proteobacterium MLMS-1, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32795..34666)
DNA (1872bp) protein (624aa)
Uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NU43_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EAT05228.1}; TaxID=262489 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium MLMS-1.;"
hypothetical protein
L3_098_000G1_scaffold_318_28
unknown

Not on your lists

comp(34679..35593)
DNA (915bp) protein (305aa)

This feature has no annotations

L3_098_000G1_scaffold_318_29
unknown

Not on your lists

comp(35595..36704)
DNA (1110bp) protein (370aa)

This feature has no annotations

L3_098_000G1_scaffold_318_30
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36764..37516)
DNA (753bp) protein (251aa)
Metallo-beta-lactamase family protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SNM9_9DELT
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:ERK90497.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
metallo-beta-lactamase
Displaying items 1-30 of 57 in total

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