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L3_098_000G1_scaffold_355

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000G1_scaffold_355_1
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(86..970)
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ILY8_9CLOT
Putative unsaturated glucuronyl hydrolase {ECO:0000313|EMBL:EXG84713.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
glucosyl hydrolase family protein
L3_098_000G1_scaffold_355_2
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(994..1749)
DNA (756bp) protein (252aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ADZ4_9CLOT
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:EFC99950.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
transcriptional regulator
L3_098_000G1_scaffold_355_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1800..3332)
DNA (1533bp) protein (511aa)
Xylulokinase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VWV4_9CLOT
Xylulokinase {ECO:0000313|EMBL:ENY95185.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
xylB; carbohydrate kinase FGGY
L3_098_000G1_scaffold_355_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3342..4337)
DNA (996bp) protein (332aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ILZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57409.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L3_098_000G1_scaffold_355_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4398..5456)
DNA (1059bp) protein (353aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ILZ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57410.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
sorbitol dehydrogenase
L3_098_000G1_scaffold_355_6
unknown

Not on your lists

comp(5819..6733)
DNA (915bp) protein (305aa)

This feature has no annotations

L3_098_000G1_scaffold_355_7
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6767..7816)
DNA (1050bp) protein (350aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NQ27_9FIRM
ribosomal RNA small subunit methyltransferase H
L3_098_000G1_scaffold_355_8
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7983..9938)
DNA (1956bp) protein (652aa)
Peptidase M56 BlaR1 n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DT27_DESRL
peptidase M56 BlaR1
Peptidase M56 BlaR1 {ECO:0000313|EMBL:AEG61132.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
L3_098_000G1_scaffold_355_9
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9991..10359)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HZ83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30022.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
CopY family transcriptional regulator
L3_098_000G1_scaffold_355_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10529..11506)
DNA (978bp) protein (326aa)
Transcriptional regulator, LacI family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G9C1_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBL13464.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_098_000G1_scaffold_355_11
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11676..12014)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6P5A0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC13671.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L3_098_000G1_scaffold_355_12
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12015..12689)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6PV98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC13672.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L3_098_000G1_scaffold_355_13
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12689..13174)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NN90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC13673.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
L3_098_000G1_scaffold_355_14
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13176..13610)
DNA (435bp) protein (145aa)
RNA polymerase sigma factor n=1 Tax=Roseburia sp. CAG:45 RepID=R6NZ22_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
L3_098_000G1_scaffold_355_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13985..14761)
DNA (777bp) protein (259aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GDX3_9FIRM
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EEU99999.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_098_000G1_scaffold_355_16
Eubacterium sp. CAG:248, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14821..15363)
DNA (543bp) protein (181aa)
Prolyl-tRNA synthetase / glutamyl-tRNA synthetase n=1 Tax=Eubacterium sp. CAG:248 RepID=R6K506_9FIRM
Prolyl-tRNA synthetase / glutamyl-tRNA synthetase {ECO:0000313|EMBL:CDB66199.1}; TaxID=1262885 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:248.;"
prolyl-tRNA synthetase / glutamyl-tRNA synthetase
L3_098_000G1_scaffold_355_17
unknown

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comp(15369..15806)
DNA (438bp) protein (146aa)

This feature has no annotations

L3_098_000G1_scaffold_355_18
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16044..17138)
DNA (1095bp) protein (365aa)
glycerol dehydrogenase n=1 Tax=Clostridium tyrobutyricum RepID=UPI00037534DF
Glycerol dehydrogenase {ECO:0000313|EMBL:KAJ51698.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
glycerol dehydrogenase
L3_098_000G1_scaffold_355_19
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17263..18594
DNA (1332bp) protein (444aa)
Transporter n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VQP8_CLOSH
transporter
Transporter {ECO:0000313|EMBL:AGC68716.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L3_098_000G1_scaffold_355_20
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18674..19039)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JPL8_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ83678.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_098_000G1_scaffold_355_21
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19163..20128)
DNA (966bp) protein (322aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HP61_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ68504.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L3_098_000G1_scaffold_355_22
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20118..20654)
DNA (537bp) protein (179aa)
RNA polymerase ECF subfamily sigma factor n=1 Tax=Roseburia sp. CAG:197 RepID=R5Y9R6_9FIRM
RNA polymerase ECF subfamily sigma factor {ECO:0000313|EMBL:CDA24218.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
RNA polymerase ECF subfamily sigma factor
L3_098_000G1_scaffold_355_23
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20845..21267)
DNA (423bp) protein (141aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Clostridium sp. CAG:167 RepID=R5WCK0_9CLOT
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
Tax=BJP_IG2102_Clostridiales_34_350
L3_098_000G1_scaffold_355_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21380..22618)
DNA (1239bp) protein (413aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5INP1_9CLOT
L3_098_000G1_scaffold_355_25
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22714..23454)
DNA (741bp) protein (247aa)
3-ketoacyl-ACP reductase n=1 Tax=Blautia producta RepID=UPI00035F2B76
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:CDA26038.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
3-oxoacyl-(acyl-carrier-protein) reductase
L3_098_000G1_scaffold_355_26
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23448..24383)
DNA (936bp) protein (312aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Eubacterium sp. CAG:156 RepID=R5YP15_9FIRM
L3_098_000G1_scaffold_355_27
Nitratifractor salsuginis, Nitratifractor, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24607..24837)
DNA (231bp) protein (77aa)
Acyl carrier protein n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6X0S3_NITSE
acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=749222 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Nitratifractor.;" source="Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1).;"
L3_098_000G1_scaffold_355_28
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(24855..25847)
DNA (993bp) protein (331aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.41 2.3.1.180)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VH67_9FIRM
L3_098_000G1_scaffold_355_29
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26120..27673)
DNA (1554bp) protein (518aa)
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes (EC:2.7.8.-)
Phospholipase D domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XN04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KHS58006.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
L3_098_000G1_scaffold_355_30
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27965..29182)
DNA (1218bp) protein (406aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JXN6_9FIRM
Tax=BJP_IG2069_Clostridiales_48_15
Displaying items 1-30 of 57 in total

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