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L3_098_000G1_scaffold_510

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000G1_scaffold_510_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(315..1178)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IW22_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44504.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Predicted SAM-dependent methyltransferases
L3_098_000G1_scaffold_510_2
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1551..2225
DNA (675bp) protein (225aa)
Phage shock protein A-like protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7HTD2_9CLOT
Phage shock protein A-like protein {ECO:0000313|EMBL:CDE42511.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
phage shock protein A, PspA
L3_098_000G1_scaffold_510_3
Bacillus amyloliquefaciens, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2341..3408
DNA (1068bp) protein (356aa)
YdjG n=6 Tax=Bacillus RepID=A7Z218_BACA2
hypothetical protein
Putative phage replication protein {ECO:0000313|EMBL:CDG28609.1}; TaxID=1338518 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus amyloliquefaciens subsp. plantarum UCMB5033.;"
L3_098_000G1_scaffold_510_4
Paenibacillus sp. MAEPY2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3405..4205
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=Paenibacillus sp. HGF5 RepID=F3MEI9_9BACL
Uncharacterized protein {ECO:0000313|EMBL:KGP83815.1}; TaxID=1395587 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MAEPY2.;"
hypothetical protein
L3_098_000G1_scaffold_510_5
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4234..5229
DNA (996bp) protein (332aa)
YdjI like protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7HSX7_9CLOT
YdjI like protein {ECO:0000313|EMBL:CDE42505.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
ydjI; putative phage protein YdjI
L3_098_000G1_scaffold_510_6
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5362..6279)
DNA (918bp) protein (306aa)
fba; Fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2NZR4_9FIRM
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:ERK43645.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L3_098_000G1_scaffold_510_7
unknown

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comp(6466..8181)
DNA (1716bp) protein (572aa)

This feature has no annotations

L3_098_000G1_scaffold_510_8
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8454..11306)
DNA (2853bp) protein (951aa)
UvrABC system protein A n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KS16_CLOPH
excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_510_9
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11391..13376)
DNA (1986bp) protein (662aa)
UvrABC system protein B n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KS15_CLOPH
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
excinuclease ABC subunit B
L3_098_000G1_scaffold_510_10
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13656..14000)
DNA (345bp) protein (115aa)
hydrogenase nickel incorporation protein HypA n=1 Tax=Clostridium tunisiense RepID=UPI000301E0DC
Hydrogenase expression/synthesis hypA family protein {ECO:0000313|EMBL:KIE47755.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hydrogenase nickel incorporation protein
L3_098_000G1_scaffold_510_11
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14020..16701)
DNA (2682bp) protein (894aa)
Pyridine nucleotide-disulfide oxidoreductase family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0DT22_CLOSO
FAD dependent oxidoreductase family protein {ECO:0000313|EMBL:KIE47906.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
pyridine nucleotide-disulfide oxidoreductase
L3_098_000G1_scaffold_510_12
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16719..17387)
DNA (669bp) protein (223aa)
Hydrogenase accessory protein HypB n=1 Tax=Eubacterium sp. 14-2 RepID=S0J722_9FIRM
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:EOT23528.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
hydrogenase accessory protein HypB
L3_098_000G1_scaffold_510_13
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17419..18399)
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KQM3_CLOPH
Putative membrane protein {ECO:0000313|EMBL:KIE47816.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L3_098_000G1_scaffold_510_14
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18699..19403
DNA (705bp) protein (235aa)
Regulatory protein GntR HTH n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BVI5_9CLOT
Regulatory protein GntR HTH {ECO:0000313|EMBL:EOR21154.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
regulatory protein GntR HTH
L3_098_000G1_scaffold_510_15
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19471..20733)
DNA (1263bp) protein (421aa)
carboxyl-terminal protease (EC:3.4.21.102)
Carboxyl-terminal protease {ECO:0000313|EMBL:ABX43953.1}; EC=3.4.21.102 {ECO:0000313|EMBL:ABX43953.1};; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
Carboxyl-terminal protease n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KIU0_CLOPH
L3_098_000G1_scaffold_510_16
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20818..22155)
DNA (1338bp) protein (446aa)
Peptidase M23B n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KIU1_CLOPH
peptidase M23B
Peptidase M23B {ECO:0000313|EMBL:ABX43954.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_510_17
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22206..23114)
DNA (909bp) protein (303aa)
Cell division protein FtsX n=1 Tax=Roseburia sp. CAG:182 RepID=R7QYL7_9FIRM
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
cell division protein FtsX
L3_098_000G1_scaffold_510_18
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23104..23886)
DNA (783bp) protein (261aa)
Cell division ATP-binding protein FtsE n=1 Tax=Roseburia sp. CAG:100 RepID=R7R6L8_9FIRM
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:CDF45365.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
cell division ATP-binding protein FtsE
L3_098_000G1_scaffold_510_19
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24019..25107)
DNA (1089bp) protein (363aa)
Transcriptional regulator, CdaR n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KIU4_CLOPH
transcriptional regulator CdaR
Transcriptional regulator, CdaR {ECO:0000313|EMBL:ABX43957.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_510_20
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25348..26460)
DNA (1113bp) protein (371aa)
ABC transporter related n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KIU5_CLOPH
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ABX43958.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_510_21
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26652..27527)
DNA (876bp) protein (292aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KIU6_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX43959.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_510_22
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27539..28273)
DNA (735bp) protein (245aa)
Glycosyltransferase WecB/TagA/CpsF family n=1 Tax=Clostridium sp. CAG:277 RepID=R7K268_9CLOT
Glycosyltransferase WecB/TagA/CpsF family {ECO:0000313|EMBL:CDE70375.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
WecB/TagA/CpsF family glycosyl transferase
L3_098_000G1_scaffold_510_23
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28407..29684)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7HSL1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE42684.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
Transcriptional regulator
L3_098_000G1_scaffold_510_24
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29908..30639
DNA (732bp) protein (244aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Clostridium sp. CAG:411 RepID=R7HTX5_9CLOT
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:CDE42686.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
short-chain dehydrogenase/reductase SDR
L3_098_000G1_scaffold_510_25
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30890..32344)
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y6A8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL04488.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
hypothetical protein
L3_098_000G1_scaffold_510_26
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32380..33804)
DNA (1425bp) protein (475aa)
MBOAT family protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7EDH3_9FIRM
MBOAT family protein {ECO:0000313|EMBL:CDE01024.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
Predicted membrane protein involved in D-alanine export
L3_098_000G1_scaffold_510_27
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(34197..35522)
DNA (1326bp) protein (442aa)
tRNA synthetase class II (D K and N) n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9RAZ2_CLOSW
Nondiscriminating aspartyl-tRNA synthetase {ECO:0000313|EMBL:EXG84991.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
tRNA synthetase class II (D K and N)
L3_098_000G1_scaffold_510_28
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36070..36831)
DNA (762bp) protein (254aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Clostridium sp. CAG:75 RepID=R5SG14_9CLOT
L3_098_000G1_scaffold_510_29
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36824..38008)
DNA (1185bp) protein (395aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
Tryptophan synthase beta chain n=1 Tax=Roseburia sp. CAG:303 RepID=R7IMT4_9FIRM
tryptophan synthase, beta subunit
L3_098_000G1_scaffold_510_30
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38039..38692)
DNA (654bp) protein (218aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
trpF; N-(5'-phosphoribosyl)anthranilate isomerase TrpF (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FRC0_9CLOT
Displaying items 1-30 of 44 in total

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