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L3_098_000G1_scaffold_915

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000G1_scaffold_915_1
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(118..747)
DNA (630bp) protein (210aa)
TetR family transcriptional regulator n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7HY96_9CLOT
TetR family transcriptional regulator {ECO:0000313|EMBL:ETA78950.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
TetR family transcriptional regulator
L3_098_000G1_scaffold_915_2
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(791..1930)
DNA (1140bp) protein (380aa)
Radical SAM domain protein n=1 Tax=Clostridium sp. D5 RepID=F0YX04_9CLOT
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:EGB93492.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L3_098_000G1_scaffold_915_3
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2014..2796)
DNA (783bp) protein (261aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DAJ3_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ERI93343.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
N-acetyltransferase GCN5
L3_098_000G1_scaffold_915_4
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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comp(3409..4173)
DNA (765bp) protein (255aa)
Uncharacterized protein id=4390593 bin=GWF2_Clostridiales_38_85 species=Anaerofustis stercorihominis genus=Anaerofustis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein
Tax=GWF2_Clostridiales_38_85_curated
L3_098_000G1_scaffold_915_5
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4184..5107)
DNA (924bp) protein (308aa)
ABC transporter n=1 Tax=Clostridium intestinale URNW RepID=U2N6H8_9CLOT
ABC transporter {ECO:0000313|EMBL:ERK31107.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
ABC transporter
L3_098_000G1_scaffold_915_6
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5108..5326)
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Turicibacter RepID=D4W4U0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF64132.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
hypothetical protein
L3_098_000G1_scaffold_915_7
Clostridium ljungdahlii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5359..6462)
DNA (1104bp) protein (368aa)
Transcriptional regulator n=2 Tax=Clostridium RepID=D8GIG3_CLOLD
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ADK17037.1}; TaxID=748727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC).;"
L3_098_000G1_scaffold_915_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6785..9004)
DNA (2220bp) protein (740aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GF76_9FIRM
Chlorophyllase.
Uncharacterized protein {ECO:0000313|EMBL:EEU99515.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_098_000G1_scaffold_915_9
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9121..9798)
DNA (678bp) protein (226aa)
Glycosyl transferase family 51 n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KQS5_CLOPH
Glycosyl transferase {ECO:0000313|EMBL:KEZ90563.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
glycosyl transferase family protein
L3_098_000G1_scaffold_915_10
unknown

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comp(9977..10654)
DNA (678bp) protein (226aa)

This feature has no annotations

L3_098_000G1_scaffold_915_11
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10865..11431)
DNA (567bp) protein (189aa)
TetR family transcriptional regulator n=1 Tax=Clostridium intestinale URNW RepID=U2NN45_9CLOT
TetR family transcriptional regulator {ECO:0000313|EMBL:ERK30286.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
TetR family transcriptional regulator
L3_098_000G1_scaffold_915_12
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11494..12030)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJQ8_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ82100.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_098_000G1_scaffold_915_13
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12148..13284)
DNA (1137bp) protein (379aa)
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJQ7_CELLD
respiratory-chain NADH dehydrogenase domain 51 kDa subunit
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit {ECO:0000313|EMBL:ADZ82099.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_098_000G1_scaffold_915_14
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13323..13895)
DNA (573bp) protein (191aa)
Regulatory protein TetR n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJQ6_CELLD
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:ADZ82098.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_098_000G1_scaffold_915_15
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14042..15631)
DNA (1590bp) protein (530aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BCC9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM70001.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_098_000G1_scaffold_915_16
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15624..16337)
DNA (714bp) protein (238aa)
ABC transporter related n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KQ53_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM70000.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_098_000G1_scaffold_915_17
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16401..16916)
DNA (516bp) protein (172aa)
Transcriptional regulator, ArsR family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BDD8_9CLOT
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ERI69853.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_098_000G1_scaffold_915_18
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17189..17599)
DNA (411bp) protein (137aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PGR7_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDC17651.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L3_098_000G1_scaffold_915_19
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17804..18361)
DNA (558bp) protein (186aa)
Chromate transporter n=1 Tax=Eubacterium sp. CAG:248 RepID=R6K6A5_9FIRM
Chromate transporter {ECO:0000313|EMBL:CCX85071.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
chromate transporter
L3_098_000G1_scaffold_915_20
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18361..18912)
DNA (552bp) protein (184aa)
Chromate transporter n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZV58_9FIRM
chromate transporter
Chromate transporter {ECO:0000313|EMBL:CDA38411.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
L3_098_000G1_scaffold_915_21
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19105..20652)
DNA (1548bp) protein (516aa)
xylB4; xylosidase/arabinosidase XylB (EC:3.2.1.37 3.2.1.55)
Xylosidase/arabinosidase XylB {ECO:0000313|EMBL:AGF58607.1}; EC=3.2.1.37 {ECO:0000313|EMBL:AGF58607.1};; EC=3.2.1.55 {ECO:0000313|EMBL:AGF58607.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Xylosidase/arabinosidase XylB n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N595_9CLOT
L3_098_000G1_scaffold_915_22
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20800..21780)
DNA (981bp) protein (327aa)
trans-1,2-dihydrobenzene-1,2-diol dehydrogenase (EC:1.3.1.20)
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase {ECO:0000313|EMBL:ADZ82935.1}; EC=1.3.1.20 {ECO:0000313|EMBL:ADZ82935.1};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JGI0_CELLD
L3_098_000G1_scaffold_915_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22036..22530)
DNA (495bp) protein (165aa)
Histidine triad (HIT) protein n=10 Tax=Clostridium RepID=N9W3A9_9CLOT
Histidine triad (HIT) protein {ECO:0000313|EMBL:ENZ06646.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
histidine triad (HIT) protein
L3_098_000G1_scaffold_915_24
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

Not on your lists

comp(22609..24768)
DNA (2160bp) protein (720aa)
Beta-glucosidase-related glycosidases n=1 Tax=Firmicutes bacterium CAG:534 RepID=R7A0D4_9FIRM
Beta-glucosidase-related glycosidases {ECO:0000313|EMBL:CDD46761.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
Beta-glucosidase-related glycosidases
L3_098_000G1_scaffold_915_25
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(24871..26868)
DNA (1998bp) protein (666aa)
Xylan alpha-1,2-glucuronidase {ECO:0000256|RuleBase:RU361198}; EC=3.2.1.131 {ECO:0000256|RuleBase:RU361198};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
alpha-glucuronidase (EC:3.2.1.139)
Alpha-glucuronidase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RQI7_9FIRM
L3_098_000G1_scaffold_915_26
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

Not on your lists

27006..27875
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:534 RepID=R7AV47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD46762.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
AraC family transcriptional regulator
L3_098_000G1_scaffold_915_27
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

Not on your lists

comp(27881..29818)
DNA (1938bp) protein (646aa)
Acetyl-xylan esterase n=1 Tax=Firmicutes bacterium CAG:534 RepID=R6ZQY5_9FIRM
Acetyl-xylan esterase {ECO:0000313|EMBL:CDD45774.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
acetyl-xylan esterase
L3_098_000G1_scaffold_915_28
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30045..31175)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9J1H5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS25047.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
glycoside hydrolase family protein
L3_098_000G1_scaffold_915_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31237..32763)
DNA (1527bp) protein (509aa)
Glycosyl hydrolase, family 43 n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8W1_9FIRM
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EEV01751.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
glycoside hydrolase family protein
L3_098_000G1_scaffold_915_30
unknown

Not on your lists

32987..33160
DNA (174bp) protein (58aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

View Taxonomy