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L3_098_000G1_scaffold_2159

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000G1_scaffold_2159_1
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(153..1454)
DNA (1302bp) protein (434aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
Glycoside hydrolase clan GH-D n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SWM9_CLOC7
glycoside hydrolase clan GH-D
L3_098_000G1_scaffold_2159_2
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1575..2438
DNA (864bp) protein (288aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SWN0_CLOC7
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADL53312.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_098_000G1_scaffold_2159_3
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2636..3661
DNA (1026bp) protein (342aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000255|HAMAP-Rule:MF_00741}; EC=6.3.3.1 {ECO:0000255|HAMAP-Rule:MF_00741};; AIR synthase {ECO:0000255|HAMAP-Rule:MF_00741}; AIRS {ECO:0000255|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000255|HAMAP-Rule:MF_00741}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=PUR5_CLOPH
L3_098_000G1_scaffold_2159_4
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3712..4332
DNA (621bp) protein (207aa)
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase n=4 Tax=Roseburia RepID=D4KJ62_9FIRM
L3_098_000G1_scaffold_2159_5
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4349..5620
DNA (1272bp) protein (424aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Clostridium sp. CAG:411 RepID=R7I5X8_9CLOT
L3_098_000G1_scaffold_2159_6
Listeria cornellensis, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

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5792..6427
DNA (636bp) protein (212aa)
Caax amino protease family protein n=1 Tax=Listeria ivanovii FSL F6-596 RepID=E3ZIP1_LISIV
Uncharacterized protein {ECO:0000313|EMBL:EUJ26887.1}; TaxID=1265820 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria cornellensis FSL F6-969.;"
CAAX protease
L3_098_000G1_scaffold_2159_7
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6790..7947
DNA (1158bp) protein (386aa)
cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PJE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC18551.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
L3_098_000G1_scaffold_2159_8
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8398..10674
DNA (2277bp) protein (759aa)
SH3 type 3 domain protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KHX0_CLOPH
SH3 type 3 domain-containing protein
SH3 type 3 domain protein {ECO:0000313|EMBL:ABX43817.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_2159_9
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10690..11982
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7I5H2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE46890.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
hypothetical protein
L3_098_000G1_scaffold_2159_10
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12174..12542
DNA (369bp) protein (123aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KHW8_CLOPH
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABX43815.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_2159_11
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12600..13241
DNA (642bp) protein (214aa)
UvrB/UvrC protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KHW7_CLOPH
UvrB/UvrC protein
UvrB/UvrC protein {ECO:0000313|EMBL:ABX43814.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_2159_12
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13234..14283
DNA (1050bp) protein (350aa)
ATP:guanido phosphotransferase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KHW6_CLOPH
ATP:guanido phosphotransferase
ATP:guanido phosphotransferase {ECO:0000313|EMBL:ABX43813.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_2159_13
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14350..16794
DNA (2445bp) protein (815aa)
ATPase AAA-2 domain protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KHW5_CLOPH
ATPase
ATPase AAA-2 domain protein {ECO:0000313|EMBL:ABX43812.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_000G1_scaffold_2159_14
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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17118..17564
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7ISX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE53742.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
hypothetical protein
L3_098_000G1_scaffold_2159_15
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17745..19100
DNA (1356bp) protein (452aa)
DNA repair protein RadA (EC:2.1.1.63)
DNA repair protein radA n=1 Tax=Clostridium sp. CAG:411 RepID=R7I068_9CLOT
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
L3_098_000G1_scaffold_2159_16
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

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19232..19960
DNA (729bp) protein (243aa)
Twitching motility protein PilJ n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BHP3_9FIRM
Twitching motility protein PilJ {ECO:0000313|EMBL:CDD65254.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
twitching motility protein PilJ
Displaying 16 items

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