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L3_098_000G1_scaffold_423

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000G1_scaffold_423_1
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3..404)
DNA (402bp) protein (134aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
DNA polymerase IV n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXH9_9BACL
nucleotidyltransferase/DNA polymerase
L3_098_000G1_scaffold_423_2
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(522..2393)
DNA (1872bp) protein (624aa)
Uncharacterized protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXH8_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EER67920.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
hypothetical protein
L3_098_000G1_scaffold_423_3
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2386..3162)
DNA (777bp) protein (259aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXH7_9BACL
L3_098_000G1_scaffold_423_4
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3164..4030)
DNA (867bp) protein (289aa)
Ribosome biogenesis GTPase A n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXH6_9BACL
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
rbgA; ribosomal biogenesis GTPase
L3_098_000G1_scaffold_423_5
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4257..4919)
DNA (663bp) protein (221aa)
ABC transporter, permease protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXH5_9BACL
ABC transporter, permease protein {ECO:0000313|EMBL:EER67642.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
metP; Methionine import system permease protein MetP
L3_098_000G1_scaffold_423_6
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4919..5932)
DNA (1014bp) protein (338aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
ABC transporter, ATP-binding protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXH4_9BACL
metN2; ABC transporter ATP-binding protein
L3_098_000G1_scaffold_423_7
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6290..7279)
DNA (990bp) protein (330aa)
DHHA1 domain protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXH3_9BACL
DHHA1 domain protein {ECO:0000313|EMBL:EER67797.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
oligoribonuclease
L3_098_000G1_scaffold_423_8
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7297..8604)
DNA (1308bp) protein (436aa)
DRTGG domain protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXH2_9BACL
DRTGG domain protein {ECO:0000313|EMBL:EER67856.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
YtoI-like protein
L3_098_000G1_scaffold_423_9
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8875..10257)
DNA (1383bp) protein (461aa)
Bifunctional protein GlmU n=1 Tax=Gemella haemolysans M341 RepID=F3A1N3_9BACL
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=562981 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans M341.;"
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase
L3_098_000G1_scaffold_423_10
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10250..11104)
DNA (855bp) protein (285aa)
Pur operon repressor PurR n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXH0_9BACL
Pur operon repressor PurR {ECO:0000313|EMBL:EER68015.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
pur operon repressor
L3_098_000G1_scaffold_423_11
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11321..12622)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXG9_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EER67942.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
hypothetical protein
L3_098_000G1_scaffold_423_12
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12845..13771
DNA (927bp) protein (309aa)
Acetyl xylan esterase (AXE1) n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXG8_9BACL
Acetyl xylan esterase (AXE1) {ECO:0000313|EMBL:EER68082.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
acetyl esterase
L3_098_000G1_scaffold_423_13
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13781..14608
DNA (828bp) protein (276aa)
Acetyl xylan esterase (AXE1) n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXG7_9BACL
Acetyl xylan esterase (AXE1) {ECO:0000313|EMBL:EER68023.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
L3_098_000G1_scaffold_423_14
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14664..15923)
DNA (1260bp) protein (420aa)
gluD; glutamate dehydrogenase, NAD-specific (EC:1.4.1.2)
Glutamate dehydrogenase n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXG6_9BACL
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
L3_098_000G1_scaffold_423_15
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16418..19057)
DNA (2640bp) protein (880aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXG5_9BACL
L3_098_000G1_scaffold_423_16
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19286..20488)
DNA (1203bp) protein (401aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EER67793.1}; EC=2.4.-.- {ECO:0000313|EMBL:EER67793.1};; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXG4_9BACL
group 1 glycosyl transferase
L3_098_000G1_scaffold_423_17
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20739..21470)
DNA (732bp) protein (244aa)
Rhodanese-like protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXG3_9BACL
Rhodanese-like protein {ECO:0000313|EMBL:EER67883.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
Rhodanese domain-containing protein
L3_098_000G1_scaffold_423_18
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21615..23138
DNA (1524bp) protein (508aa)
Chloride transporter, ClC family n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXG2_9BACL
Chloride transporter, ClC family {ECO:0000313|EMBL:EER67563.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
chloride channel protein
L3_098_000G1_scaffold_423_19
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23182..23979)
DNA (798bp) protein (266aa)
Cof-like hydrolase n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXG1_9BACL
Cof-like hydrolase {ECO:0000313|EMBL:EER67670.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
HAD-superfamily hydrolase, subfamily IIB
L3_098_000G1_scaffold_423_20
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23972..24985)
DNA (1014bp) protein (338aa)
Sugar-binding domain protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXG0_9BACL
Sugar-binding domain protein {ECO:0000313|EMBL:EER67773.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
scrR; sucrose operon repressor
L3_098_000G1_scaffold_423_21
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25415..26158
DNA (744bp) protein (248aa)
ABC transporter, ATP-binding protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXF9_9BACL
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EER67766.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
ABC transporter ATP-binding protein
L3_098_000G1_scaffold_423_22
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26142..26813
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Gemella haemolysans M341 RepID=F3A1P6_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EGF85812.1}; TaxID=562981 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans M341.;"
metI; ABC transporter permease
L3_098_000G1_scaffold_423_23
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26818..27642
DNA (825bp) protein (275aa)
Lipoprotein n=1 Tax=Gemella haemolysans M341 RepID=F3A1P7_9BACL
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=562981 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans M341.;"
YaeC family protein
L3_098_000G1_scaffold_423_24
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27736..28569
DNA (834bp) protein (278aa)
Lipoprotein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXF6_9BACL
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
YaeC family protein
L3_098_000G1_scaffold_423_25
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28899..29126
DNA (228bp) protein (76aa)
DNA-binding helix-turn-helix protein n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9MY20_FINMA
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EGS35346.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY403409CC001050417.;"
hypothetical protein
L3_098_000G1_scaffold_423_26
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

29142..30893
DNA (1752bp) protein (584aa)
Putative type I restriction-modification system, M subunit n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LEQ7_9FIRM
Putative type I restriction-modification system, M subunit {ECO:0000313|EMBL:EFR60006.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
type I restriction-modification system DNA methylase
L3_098_000G1_scaffold_423_27
Vibrionales bacterium SWAT-3, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30883..32106
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KYV4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDK29387.1}; TaxID=391574 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; unclassified Vibrionales.;" source="Vibrionales bacterium (strain SWAT-3).;"
hsdS2; type I restriction enzyme ZgaDII, S subunit
L3_098_000G1_scaffold_423_28
Streptococcus mitis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32119..35355
DNA (3237bp) protein (1079aa)
Type I site-specific deoxyribonuclease, HsdR family protein {ECO:0000313|EMBL:KEQ45082.1}; EC=3.1.21.3 {ECO:0000313|EMBL:KEQ45082.1};; TaxID=28037 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus mitis.;"
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LEQ5_9FIRM
type I restriction enzyme
L3_098_000G1_scaffold_423_29
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(35711..37297)
DNA (1587bp) protein (529aa)
PTS system maltose-specific EIICB component {ECO:0000313|EMBL:EER68120.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EER68120.1};; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
glvC; PTS system, alpha-glucoside-specific IIBC component domain protein (EC:2.7.1.69)
PTS system maltose-specific EIICB component n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXF5_9BACL
L3_098_000G1_scaffold_423_30
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(37316..38110)
DNA (795bp) protein (265aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXF4_9BACL
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EER67791.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
endonuclease/exonuclease/phosphatase
Displaying items 1-30 of 43 in total

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