ggKbase home page

L3_098_000G1_scaffold_1595

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000G1_scaffold_1595_1
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2..436
DNA (435bp) protein (145aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
ABC transporter, ATP-binding protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYJ3_9BACL
spermidine/putrescine ABC transporter ATP-binding protein
L3_098_000G1_scaffold_1595_2
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

440..1258
DNA (819bp) protein (273aa)
ABC transporter, permease protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYJ4_9BACL
ABC transporter, permease protein {ECO:0000313|EMBL:EER68100.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
potB; spermidine/putrescine ABC transporter permease
L3_098_000G1_scaffold_1595_3
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1258..2058
DNA (801bp) protein (267aa)
ABC transporter, permease protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYJ5_9BACL
ABC transporter, permease protein {ECO:0000313|EMBL:EER68153.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
potC; spermidine/putrescine ABC transporter permease
L3_098_000G1_scaffold_1595_4
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2060..3139
DNA (1080bp) protein (360aa)
ABC transporter, solute-binding protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYJ6_9BACL
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EER67944.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
spermidine/putrescine-binding periplasmic protein
L3_098_000G1_scaffold_1595_5
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3866..4186
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYJ7_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EER67895.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
L3_098_000G1_scaffold_1595_6
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4608..6317
DNA (1710bp) protein (570aa)
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EER67709.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EER67709.1};; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunit gamma and tau n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYK0_9BACL
L3_098_000G1_scaffold_1595_7
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6433..6750
DNA (318bp) protein (106aa)
Nucleoid-associated protein GEMHA0001_0541 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYK1_9BACL
Nucleoid-associated protein GEMHA0001_0541 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
yaaK; hypothetical protein
L3_098_000G1_scaffold_1595_8
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6752..7348
DNA (597bp) protein (199aa)
Recombination protein RecR n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYK2_9BACL
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
recR; recombination protein RecR
L3_098_000G1_scaffold_1595_9
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7365..9341
DNA (1977bp) protein (659aa)
Transketolase {ECO:0000313|EMBL:EER67801.1}; EC=2.2.1.1 {ECO:0000313|EMBL:EER67801.1};; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
Transketolase n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYK3_9BACL
transketolase
L3_098_000G1_scaffold_1595_10
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9331..9699
DNA (369bp) protein (123aa)
S1 RNA binding domain protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYK4_9BACL
S1 RNA binding domain protein {ECO:0000313|EMBL:EER67970.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
S1 RNA-binding domain protein
L3_098_000G1_scaffold_1595_11
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


9999..12620
DNA (2622bp) protein (874aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=562981 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans M341.;"
Alanine--tRNA ligase n=1 Tax=Gemella haemolysans M341 RepID=F3A0K8_9BACL
alaS; alanyl-tRNA synthetase
L3_098_000G1_scaffold_1595_12
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12807..13112
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYK6_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EER67864.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
hypothetical protein
L3_098_000G1_scaffold_1595_13
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13127..13522
DNA (396bp) protein (132aa)
N utilization substance protein B homolog n=1 Tax=Gemella haemolysans M341 RepID=F3A0K6_9BACL
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=562981 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans M341.;"
nusB; transcription antitermination protein NusB
L3_098_000G1_scaffold_1595_14
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13536..14792
DNA (1257bp) protein (419aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYK8_9BACL
exodeoxyribonuclease VII large subunit
L3_098_000G1_scaffold_1595_15
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14792..14992
DNA (201bp) protein (67aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYK9_9BACL
Exodeoxyribonuclease VII small subunit
L3_098_000G1_scaffold_1595_16
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14985..15845
DNA (861bp) protein (287aa)
Polyprenyl synthetase {ECO:0000313|EMBL:EER67570.1}; EC=2.5.1.10 {ECO:0000313|EMBL:EER67570.1};; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
Polyprenyl synthetase n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYL0_9BACL
hypothetical protein
L3_098_000G1_scaffold_1595_17
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16343..17491
DNA (1149bp) protein (383aa)
Glycerate kinase {ECO:0000313|EMBL:EER67680.1}; EC=2.7.1.31 {ECO:0000313|EMBL:EER67680.1};; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
glycerate kinase (EC:2.7.1.31)
Glycerate kinase n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYL1_9BACL
L3_098_000G1_scaffold_1595_18
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17481..18344
DNA (864bp) protein (288aa)
Putative membrane protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYL2_9BACL
Putative membrane protein {ECO:0000313|EMBL:EER68048.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
Permeases of the drug/metabolite transporter (DMT) superfamily
L3_098_000G1_scaffold_1595_19
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18357..19253
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYL3_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EER68156.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
peptidase C39
L3_098_000G1_scaffold_1595_20
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19454..20194
DNA (741bp) protein (247aa)
FeS assembly ATPase SufC n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYL4_9BACL
FeS assembly ATPase SufC {ECO:0000313|EMBL:EER67905.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
ABC transporter, ATP-binding protein
L3_098_000G1_scaffold_1595_21
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20196..21482
DNA (1287bp) protein (429aa)
Putative FeS assembly protein SufD n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYL5_9BACL
Putative FeS assembly protein SufD {ECO:0000313|EMBL:EER67818.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
hypothetical protein
L3_098_000G1_scaffold_1595_22
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21485..22714
DNA (1230bp) protein (410aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
Cysteine desulfurase n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYL6_9BACL
hypothetical protein
L3_098_000G1_scaffold_1595_23
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22704..23132
DNA (429bp) protein (143aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYL7_9BACL
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:EER67696.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
sufU; NifU family SUF system FeS assembly protein
L3_098_000G1_scaffold_1595_24
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23141..24547
DNA (1407bp) protein (469aa)
FeS assembly protein SufB n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYL8_9BACL
FeS assembly protein SufB {ECO:0000313|EMBL:EER68056.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
hypothetical protein
L3_098_000G1_scaffold_1595_25
unknown

Not on your lists

24608..24709
DNA (102bp) protein (34aa)

This feature has no annotations

L3_098_000G1_scaffold_1595_26
Streptococcus mitis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24654..24851
DNA (198bp) protein (66aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Streptococcus mitis SK1080 RepID=F9HNK4_STRMT
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:KEQ35081.1}; TaxID=28037 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus mitis.;"
Displaying 26 items

View Taxonomy