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L3_098_000G1_scaffold_196

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000G1_scaffold_196_1
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(3..419)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SIG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46402.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_098_000G1_scaffold_196_2
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(416..1180)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2NQP7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK31181.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
L3_098_000G1_scaffold_196_3
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(1177..2331)
DNA (1155bp) protein (385aa)
Sensor histidine kinase putative VirS n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RBY1_9FIRM
Sensor histidine kinase putative VirS {ECO:0000313|EMBL:CDC46403.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
L3_098_000G1_scaffold_196_4
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(2333..3037)
DNA (705bp) protein (235aa)
Response regulator putative VirR n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RM55_9FIRM
Response regulator putative VirR {ECO:0000313|EMBL:CDC46404.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
response regulator
L3_098_000G1_scaffold_196_5
unknown

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comp(3015..3176)
DNA (162bp) protein (54aa)

This feature has no annotations

L3_098_000G1_scaffold_196_6
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3328..4119)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83781.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L3_098_000G1_scaffold_196_7
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4119..5009)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83782.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
ABC transporter
L3_098_000G1_scaffold_196_8
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5006..5632)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83783.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
TetR family transcriptional regulator
L3_098_000G1_scaffold_196_9
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5619..6020)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C765_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS72852.1}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
hypothetical protein
L3_098_000G1_scaffold_196_10
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6154..6414
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HEE7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF00195.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L3_098_000G1_scaffold_196_11
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(6569..7108)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R2X2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42320.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
fumarate hydratase
L3_098_000G1_scaffold_196_12
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(7128..7973)
DNA (846bp) protein (282aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region (EC:4.2.1.2)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RAI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42319.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_098_000G1_scaffold_196_13
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7995..8945)
DNA (951bp) protein (317aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=C9L6Q2_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EGG80517.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
hypothetical protein
L3_098_000G1_scaffold_196_14
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(9033..10286)
DNA (1254bp) protein (418aa)
methylaspartate ammonia-lyase (EC:4.3.1.2)
Methylaspartate ammonia-lyase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R2W7_9FIRM
Methylaspartate ammonia-lyase {ECO:0000313|EMBL:CDC42315.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_098_000G1_scaffold_196_15
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10374..11822)
DNA (1449bp) protein (483aa)
Glutamate mutase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_01923}; EC=5.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01923};; Glutamate mutase E chain {ECO:0000256|HAMAP-Rule:MF_01923}; Glutamate mutase large subunit {ECO:0000256|HAMAP-Rule:MF_01923}; Methylaspartate mutase {ECO:0000256|HAMAP-Rule:MF_01923}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
methylaspartate mutase subunit E (EC:5.4.99.1)
Methylaspartate mutase, E subunit n=3 Tax=Lachnospiraceae RepID=C9L6Q0_BLAHA
L3_098_000G1_scaffold_196_16
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(11806..13194)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RH20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42311.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
mutL; protein MutL
L3_098_000G1_scaffold_196_17
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(13216..13647)
DNA (432bp) protein (144aa)
Glutamate mutase sigma subunit {ECO:0000256|HAMAP-Rule:MF_00526}; EC=5.4.99.1 {ECO:0000256|HAMAP-Rule:MF_00526};; Glutamate mutase S chain {ECO:0000256|HAMAP-Rule:MF_00526}; Glutamate mutase small subunit {ECO:0000256|HAMAP-Rule:MF_00526}; Methylaspartate mutase {ECO:0000256|HAMAP-Rule:MF_00526}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
mamA; methylaspartate mutase, S subunit (EC:5.4.99.1)
Methylaspartate mutase S chain n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RAH5_9FIRM
L3_098_000G1_scaffold_196_18
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13678..15081)
DNA (1404bp) protein (468aa)
citF; citrate lyase alpha chain (EC:4.1.3.6 2.8.3.10)
Citrate lyase n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3ABP0_9FIRM
Citrate lyase {ECO:0000313|EMBL:EGG80522.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
L3_098_000G1_scaffold_196_19
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15078..15953)
DNA (876bp) protein (292aa)
citE; citrate lyase subunit beta (EC:4.1.3.6 4.1.3.34)
Citrate lyase beta subunit n=2 Tax=Lachnospiraceae RepID=R6NK22_9FIRM
Citrate lyase beta subunit {ECO:0000313|EMBL:CDC08714.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
L3_098_000G1_scaffold_196_20
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15950..16222)
DNA (273bp) protein (91aa)
Citrate lyase acyl carrier protein {ECO:0000313|EMBL:EEX22089.1}; EC=4.1.3.6 {ECO:0000313|EMBL:EEX22089.1};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
citrate lyase subunit gamma n=1 Tax=Blautia producta RepID=UPI000368E41B
hypothetical protein
L3_098_000G1_scaffold_196_21
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(16258..16890)
DNA (633bp) protein (211aa)
Formimidoyltetrahydrofolate cyclodeaminase (EC:4.3.1.4)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S6J6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42302.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_098_000G1_scaffold_196_22
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(16918..17811)
DNA (894bp) protein (298aa)
glutamate formiminotransferase (EC:2.1.2.5)
Glutamate formiminotransferase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RH09_9FIRM
Glutamate formiminotransferase {ECO:0000313|EMBL:CDC42301.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_098_000G1_scaffold_196_23
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(17825..19081)
DNA (1257bp) protein (419aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R2V3_9FIRM
L3_098_000G1_scaffold_196_24
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(19115..21160)
DNA (2046bp) protein (682aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RAG8_9FIRM
L3_098_000G1_scaffold_196_25
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21394..22737)
DNA (1344bp) protein (448aa)
yidJ; sulfatase YidJ (EC:3.1.6.-)
Putative arylsulfatase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TJY6_9CLOT
Putative arylsulfatase {ECO:0000313|EMBL:CCZ59311.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L3_098_000G1_scaffold_196_26
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22750..23613)
DNA (864bp) protein (288aa)
sn-glycerol-3-phosphate-binding protein n=2 Tax=Clostridium RepID=R5T831_9CLOT
sn-glycerol-3-phosphate-binding protein {ECO:0000313|EMBL:CCZ59309.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
binding-protein-dependent transport system inner membrane protein
L3_098_000G1_scaffold_196_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23624..24520)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VZJ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY96135.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
binding-protein-dependent transport system inner membrane protein
L3_098_000G1_scaffold_196_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24532..25836)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W007_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY96134.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
extracellular solute-binding protein
L3_098_000G1_scaffold_196_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26089..27597)
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XJL1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY96133.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_098_000G1_scaffold_196_30
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27594..29378)
DNA (1785bp) protein (595aa)
Putative HAMP domain protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5SZU5_9CLOT
Putative HAMP domain protein {ECO:0000313|EMBL:CCZ59300.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
sensor with HAMP domain
Displaying items 1-30 of 75 in total

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