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L3_098_000G1_scaffold_222

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000G1_scaffold_222_1
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(144..788)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B9R6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84188.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L3_098_000G1_scaffold_222_2
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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878..1702
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B9R7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84189.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
MerR family transcriptional regulator
L3_098_000G1_scaffold_222_3
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1865..4078
DNA (2214bp) protein (738aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3ADM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84665.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
cell surface protein
L3_098_000G1_scaffold_222_4
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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4287..4970
DNA (684bp) protein (228aa)
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED (EC:5.4.2.6)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QW61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32873.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L3_098_000G1_scaffold_222_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5042..5443
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GFR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU99360.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_098_000G1_scaffold_222_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5649..6257)
DNA (609bp) protein (203aa)
Oxidoreductase, aldo/keto reductase family protein n=2 Tax=Ruminococcus gnavus RepID=A7AXW5_RUMGN
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EDN79362.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
aldo/keto reductase oxidoreductase
L3_098_000G1_scaffold_222_7
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6244..6489)
DNA (246bp) protein (82aa)
Oxidoreductase aldo/keto reductase family protein n=1 Tax=Clostridium sp. CAG:632 RepID=R5JTA4_9CLOT
Oxidoreductase aldo/keto reductase family protein {ECO:0000313|EMBL:CCY57798.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
aldo/keto reductase, diketogulonate reductase
L3_098_000G1_scaffold_222_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6637..7494
DNA (858bp) protein (286aa)
Transcriptional regulator, LysR family n=2 Tax=Ruminococcus gnavus RepID=A7AXW4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19114.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
LysR family transcriptional regulator
L3_098_000G1_scaffold_222_9
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7491..9152)
DNA (1662bp) protein (554aa)
anaerobic cobaltochelatase (EC:4.99.1.3)
Cobalt chelatase n=1 Tax=Blautia sp. CAG:257 RepID=R5WR78_9FIRM
Cobalt chelatase {ECO:0000313|EMBL:CDA05095.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
L3_098_000G1_scaffold_222_10
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9149..9925)
DNA (777bp) protein (259aa)
Cobalt ABC transporter, permease protein CbiQ n=3 Tax=Lachnospiraceae RepID=C9L8T7_BLAHA
Cobalt ABC transporter, permease protein CbiQ {ECO:0000313|EMBL:EEX21486.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
cobalt ABC transporter, permease protein CbiQ
L3_098_000G1_scaffold_222_11
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9950..10252)
DNA (303bp) protein (101aa)
Cobalt transport protein CbiN n=3 Tax=Lachnospiraceae RepID=C9L8T8_BLAHA
Cobalt transport protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; Energy-coupling factor transporter probable substrate-capture protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
cobalt/cobalamin transport protein CbiN
L3_098_000G1_scaffold_222_12
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10254..11000)
DNA (747bp) protein (249aa)
Cobalt transport protein CbiM n=1 Tax=Blautia sp. CAG:257 RepID=R5WP19_9FIRM
Cobalt transport protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Energy-coupling factor transporter probable substrate-capture protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Flags: Precursor;; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
cobalamin biosynthesis protein CbiM
L3_098_000G1_scaffold_222_13
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11488..12717
DNA (1230bp) protein (410aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase n=2 Tax=Lachnospiraceae RepID=C9L8U1_BLAHA
L3_098_000G1_scaffold_222_14
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

12707..13207
DNA (501bp) protein (167aa)
siroheme synthase, N-terminal domain (EC:1.3.1.76 4.99.1.4)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RFR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44154.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_098_000G1_scaffold_222_15
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13195..14085
DNA (891bp) protein (297aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
hydroxymethylbilane synthase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L8U3_BLAHA
L3_098_000G1_scaffold_222_16
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

14099..15616
DNA (1518bp) protein (506aa)
uroporphyrinogen-III synthase/uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107 4.2.1.75)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R8G3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44150.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_098_000G1_scaffold_222_17
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

15637..16623
DNA (987bp) protein (329aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
porphobilinogen synthase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SC15_9FIRM
L3_098_000G1_scaffold_222_18
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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16623..17897
DNA (1275bp) protein (425aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=3 Tax=Lachnospiraceae RepID=C9L8U6_BLAHA
L3_098_000G1_scaffold_222_19
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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17916..19628
DNA (1713bp) protein (571aa)
MutS domain V protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L8U7_BLAHA
MutS domain V protein {ECO:0000313|EMBL:EEX21496.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
DNA mismatch repair protein MutS domain-containing protein
L3_098_000G1_scaffold_222_20
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19956..20189)
DNA (234bp) protein (78aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=C9L8U9_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EEX21498.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
hypothetical protein
L3_098_000G1_scaffold_222_21
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(20266..21960)
DNA (1695bp) protein (565aa)
Putative protease CspA n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RFQ3_9FIRM
Putative protease CspA {ECO:0000313|EMBL:CDC44139.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
peptidase S8/S53 subtilisin kexin sedolisin
L3_098_000G1_scaffold_222_22
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22094..22930
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NGW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC10415.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
Subtilisin-like serine proteases
L3_098_000G1_scaffold_222_23
unknown

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22927..23019
DNA (93bp) protein (31aa)

This feature has no annotations

L3_098_000G1_scaffold_222_24
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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23025..24413
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VKI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC92751.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
2-isopropylmalate synthase
L3_098_000G1_scaffold_222_25
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

24433..25098
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RTA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC48509.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
GntR family transcriptional regulator protein
L3_098_000G1_scaffold_222_26
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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25120..26328
DNA (1209bp) protein (403aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
isocitrate dehydrogenase, NADP-dependent, eukaryotic type (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RZP4_9FIRM
L3_098_000G1_scaffold_222_27
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(26372..28282)
DNA (1911bp) protein (637aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RT96_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC48504.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_098_000G1_scaffold_222_28
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

28447..29094
DNA (648bp) protein (216aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SPK2_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
CoA-binding protein
L3_098_000G1_scaffold_222_29
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

29178..30656
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RT84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC48499.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region
L3_098_000G1_scaffold_222_30
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30675..31823
DNA (1149bp) protein (383aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AGB3_9FIRM
Displaying items 1-30 of 97 in total

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