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L3_098_000G1_scaffold_958

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000G1_scaffold_958_1
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(144..2132)
DNA (1989bp) protein (663aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JPE1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97568.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
sulfatase
L3_098_000G1_scaffold_958_2
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(2256..2615)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R694_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34284.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L3_098_000G1_scaffold_958_3
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(2612..3316)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R0Q9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34283.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L3_098_000G1_scaffold_958_4
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3402..4670)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YP81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD66181.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L3_098_000G1_scaffold_958_5
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4866..6110)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NM45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC09429.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
stage II sporulation protein P
L3_098_000G1_scaffold_958_6
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6154..7065)
DNA (912bp) protein (304aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
Germination protease. (EC:3.4.24.78)
peptidase n=1 Tax=Blautia producta RepID=UPI00035D3BCD
L3_098_000G1_scaffold_958_7
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists


7291..7554
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RIV6_9FIRM
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
30S ribosomal protein S20
L3_098_000G1_scaffold_958_8
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(7635..8615)
DNA (981bp) protein (327aa)
DNA polymerase III, delta subunit (EC:2.7.7.7)
DNA polymerase III n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SM80_9FIRM
DNA polymerase III {ECO:0000313|EMBL:CDC47702.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_098_000G1_scaffold_958_9
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8681..10903)
DNA (2223bp) protein (741aa)
DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NBD3_9FIRM
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:CDC09418.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
DNA internalization-related competence protein ComEC/Rec2
L3_098_000G1_scaffold_958_10
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(10896..11846)
DNA (951bp) protein (317aa)
Putative germination protein GerM n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SM77_9FIRM
Putative germination protein GerM {ECO:0000313|EMBL:CDC47697.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Sporulation and spore germination.
L3_098_000G1_scaffold_958_11
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(11859..13286)
DNA (1428bp) protein (476aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. (EC:2.7.13.3)
Putative sensory transduction histidine kinase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RXC4_9FIRM
L3_098_000G1_scaffold_958_12
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13296..13985)
DNA (690bp) protein (230aa)
Response regulator receiver domain protein n=3 Tax=Lachnospiraceae RepID=C9LCS2_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:CDC09409.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_098_000G1_scaffold_958_13
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(13996..14646)
DNA (651bp) protein (217aa)
Competence protein CelA n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RFN2_9FIRM
Competence protein CelA {ECO:0000313|EMBL:CDC47693.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
competence protein ComEA helix-hairpin-helix repeat region
L3_098_000G1_scaffold_958_14
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14927..15361)
DNA (435bp) protein (145aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=C9LCS4_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EGG81224.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
hypothetical protein
L3_098_000G1_scaffold_958_15
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(15433..16623)
DNA (1191bp) protein (397aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
acetylornithine aminotransferase apoenzyme (EC:2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RFM7_9FIRM
L3_098_000G1_scaffold_958_16
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(16610..17503)
DNA (894bp) protein (298aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RIT4_9FIRM
L3_098_000G1_scaffold_958_17
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(17544..18767)
DNA (1224bp) protein (408aa)
glutamate N-acetyltransferase/amino-acid acetyltransferase (EC:2.3.1.35 2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RFM0_9FIRM
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_098_000G1_scaffold_958_18
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(18805..19845)
DNA (1041bp) protein (347aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
N-acetyl-gamma-glutamyl-phosphate reductase, common form (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SM67_9FIRM
L3_098_000G1_scaffold_958_19
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20230..21456
DNA (1227bp) protein (409aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
argininosuccinate synthase (EC:6.3.4.5)
argininosuccinate synthase n=1 Tax=Blautia producta RepID=UPI0003782E7F
L3_098_000G1_scaffold_958_20
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21548..22798)
DNA (1251bp) protein (417aa)
GTPase HflX n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NM19_9FIRM
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
GTP-binding protein HflX
L3_098_000G1_scaffold_958_21
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23034..24035)
DNA (1002bp) protein (334aa)
Putative tetratricopeptide repeat-containing domain protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6N7N6_9FIRM
Putative tetratricopeptide repeat-containing domain protein {ECO:0000313|EMBL:CDC07115.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
hypothetical protein
L3_098_000G1_scaffold_958_22
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24084..25430)
DNA (1347bp) protein (449aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LBH6_BLAHA
L3_098_000G1_scaffold_958_23
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(25505..26428)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RIQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47650.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
dTDP-glucose pyrophosphorylase
L3_098_000G1_scaffold_958_24
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26469..27539)
DNA (1071bp) protein (357aa)
Peptide chain release factor 1 n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LA43_BLAHA
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
bacterial peptide chain release factor 1 (bRF-1)
L3_098_000G1_scaffold_958_25
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27532..28389)
DNA (858bp) protein (286aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
Release factor glutamine methyltransferase n=3 Tax=Lachnospiraceae RepID=C9LA44_BLAHA
protein-(glutamine-N5) methyltransferase, release factor-specific
L3_098_000G1_scaffold_958_26
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(28391..29368)
DNA (978bp) protein (326aa)
Putative lipoprotein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SM42_9FIRM
Putative lipoprotein {ECO:0000313|EMBL:CDC47647.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Predicted metal-dependent enzyme
L3_098_000G1_scaffold_958_27
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(29426..29629)
DNA (204bp) protein (68aa)
50S ribosomal protein L31 n=3 Tax=Lachnospiraceae RepID=C9LA46_BLAHA
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
LSU ribosomal protein L31P
L3_098_000G1_scaffold_958_28
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(29748..31169)
DNA (1422bp) protein (474aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Transcription termination factor Rho n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RPQ3_9FIRM
transcription termination factor Rho
L3_098_000G1_scaffold_958_29
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31424..32302)
DNA (879bp) protein (293aa)
LysR substrate binding domain protein n=2 Tax=Lachnospiraceae RepID=C9LCS7_BLAHA
LysR substrate binding domain protein {ECO:0000313|EMBL:EEX20206.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
LysR family transcriptional regulator
L3_098_000G1_scaffold_958_30
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32421..33209
DNA (789bp) protein (263aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=R6PHZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81228.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
Predicted permeases
Displaying items 1-30 of 35 in total

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