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L3_098_000G1_scaffold_1294

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000G1_scaffold_1294_1
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(420..1781)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Ruminococcus torques CAG:61 RepID=R5QU69_9FIRM
Na+ driven multidrug efflux pump
Uncharacterized protein {ECO:0000313|EMBL:CCZ25796.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_098_000G1_scaffold_1294_2
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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1907..2434
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JVE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38068.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
transcriptional regulator
L3_098_000G1_scaffold_1294_3
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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2552..2803
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Treponema socranskii subsp. paredis ATCC 35535 RepID=S3JNM0_TRESO
Uncharacterized protein {ECO:0000313|EMBL:EPF26036.1}; TaxID=1125701 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. paredis ATCC 35535.;"
hypothetical protein
L3_098_000G1_scaffold_1294_4
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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3050..3475
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XM34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07392.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L3_098_000G1_scaffold_1294_5
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3468..4466
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WTR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07391.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L3_098_000G1_scaffold_1294_6
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4551..4934)
DNA (384bp) protein (128aa)
CHC2 zinc finger domain protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0GA85_9FIRM
CHC2 zinc finger domain protein {ECO:0000313|EMBL:EDR45417.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
DNA primase (bacterial type)
L3_098_000G1_scaffold_1294_7
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5141..5818)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RTZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75311.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
hypothetical protein
L3_098_000G1_scaffold_1294_8
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5880..6077)
DNA (198bp) protein (66aa)
Resolvase, N-terminal domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJW4_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EEC90682.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L3_098_000G1_scaffold_1294_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6182..6928
DNA (747bp) protein (249aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=R6PTQ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24109.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Acetyltransferase (GNAT) family.
L3_098_000G1_scaffold_1294_10
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7123..7728
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VG67_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO57493.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_098_000G1_scaffold_1294_11
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7817..8557)
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T1S8_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN95572.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_098_000G1_scaffold_1294_12
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8721..9617
DNA (897bp) protein (299aa)
LysR family transcriptional regulator transcription activator of glutamate synthase operon n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDI8_9FIRM
LysR family transcriptional regulator transcription activator of glutamate synthase operon {ECO:0000313|EMBL:CDE37386.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Transcriptional regulator
L3_098_000G1_scaffold_1294_13
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9620..9934
DNA (315bp) protein (105aa)
LIV-E family branched chain amino acid exporter AzlC n=1 Tax=Blautia sp. CAG:257 RepID=R5WPM8_9FIRM
LIV-E family branched chain amino acid exporter AzlC {ECO:0000313|EMBL:CDA05358.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
branched-chain amino acid transporter AzlC
L3_098_000G1_scaffold_1294_14
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9879..10358
DNA (480bp) protein (160aa)
Azaleucine resistance protein AzlC n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LJP4_9FIRM
Azaleucine resistance protein AzlC {ECO:0000313|EMBL:EET59167.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
branched-chain amino acid transporter AzlC
L3_098_000G1_scaffold_1294_15
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10355..10678
DNA (324bp) protein (108aa)
branched-chain amino acid transporter AzlD n=1 Tax=Blautia producta RepID=UPI000364AAD8
azlD; branched-chain amino acid transport protein
Branched-chain amino acid transport protein AzlD {ECO:0000313|EMBL:CDA05357.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
L3_098_000G1_scaffold_1294_16
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

10935..12146
DNA (1212bp) protein (404aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
aspartate kinase, monofunctional class (EC:2.7.2.4)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000379E81D
L3_098_000G1_scaffold_1294_17
unknown

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12174..12278
DNA (105bp) protein (35aa)

This feature has no annotations

L3_098_000G1_scaffold_1294_18
Firmicutes bacterium CAG:308, Firmicutes, Bacteria

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12332..12859
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:308 RepID=R7A632_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD50949.1}; TaxID=1263016 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:308.;"
L3_098_000G1_scaffold_1294_19
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12876..14003
DNA (1128bp) protein (376aa)
ROK family protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F524_CLOSG
ROK family protein {ECO:0000313|EMBL:EHN13486.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA 3679.;"
ROK family protein
L3_098_000G1_scaffold_1294_20
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14119..15168
DNA (1050bp) protein (350aa)
sorbitol dehydrogenase (EC:1.1.1.14)
L-iditol 2-dehydrogenase n=2 Tax=Lachnospiraceae RepID=R6GEN9_9FIRM
L-iditol 2-dehydrogenase {ECO:0000313|EMBL:CDB19721.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
L3_098_000G1_scaffold_1294_21
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

15334..16503
DNA (1170bp) protein (390aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RGU9_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CDC42241.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
23S rRNA (uracil-5-)-methyltransferase RumA
L3_098_000G1_scaffold_1294_22
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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16794..18290
DNA (1497bp) protein (499aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L8B9_BLAHA
L3_098_000G1_scaffold_1294_23
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18358..19227
DNA (870bp) protein (290aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6NXK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC10976.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
Imidazolonepropionase and related amidohydrolases
L3_098_000G1_scaffold_1294_24
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19278..20558
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NIF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC10975.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
amidohydrolase
L3_098_000G1_scaffold_1294_25
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(20629..21126)
DNA (498bp) protein (166aa)
ADP-ribose pyrophosphatase (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RLG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43886.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_098_000G1_scaffold_1294_26
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21123..22331)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NAX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC09238.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
RNA-binding protein AU-1/Ribonuclease E/G
L3_098_000G1_scaffold_1294_27
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(22324..23031)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R4M0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43888.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_098_000G1_scaffold_1294_28
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23021..24880)
DNA (1860bp) protein (620aa)
Radical SAM domain protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L8D4_BLAHA
Radical SAM domain protein {ECO:0000313|EMBL:EEX21626.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
Fe-S oxidoreductase
L3_098_000G1_scaffold_1294_29
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

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25706..26893
DNA (1188bp) protein (396aa)
AIPR protein n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7J8K7_9FUSO
AIPR protein {ECO:0000313|EMBL:CDE60234.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
AIPR protein.
L3_098_000G1_scaffold_1294_30
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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27615..28241
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N6X4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS79064.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Region found in RelA / SpoT proteins.
Displaying items 1-30 of 31 in total

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