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L3_098_000M1_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 142 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_12_1
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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103..984
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZMC4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12420.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
AraC family transcriptional regulator
L3_098_000M1_scaffold_12_2
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1162..1836
DNA (675bp) protein (225aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=3 Tax=Parabacteroides RepID=B7BC52_9PORP
L3_098_000M1_scaffold_12_3
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1843..2721)
DNA (879bp) protein (293aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=B7BC53_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78935.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L3_098_000M1_scaffold_12_4
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2927..5533
DNA (2607bp) protein (869aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5YFR7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12417.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
glycoside hydrolase family protein
L3_098_000M1_scaffold_12_5
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5609..6583)
DNA (975bp) protein (325aa)
Mannose-6-phosphate isomerase, class I n=3 Tax=Parabacteroides RepID=K5ZLP1_9PORP
Putative mannose-6-phosphate isomerase class I {ECO:0000313|EMBL:CCX78933.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
mannose-6-phosphate isomerase
L3_098_000M1_scaffold_12_6
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6705..8714)
DNA (2010bp) protein (670aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Alpha amylase, catalytic domain protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BC46_9PORP
1,4-alpha-glucan branching protein
L3_098_000M1_scaffold_12_7
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8782..11097)
DNA (2316bp) protein (772aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DFC3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78930.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
cation/H+ antiporter
L3_098_000M1_scaffold_12_8
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11161..11346
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K6A9R7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12413.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L3_098_000M1_scaffold_12_9
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11623..13740)
DNA (2118bp) protein (706aa)
Glycosyl hydrolase family 2 sugar binding domain protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DF39_9PORP
Glycosyl hydrolase family 2 sugar binding domain protein {ECO:0000313|EMBL:CCX78835.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
putative beta-galactosidase
L3_098_000M1_scaffold_12_10
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13888..17919
DNA (4032bp) protein (1344aa)
Response regulator receiver domain protein n=2 Tax=Parabacteroides RepID=R5DS44_9PORP
Response regulator receiver domain protein {ECO:0000313|EMBL:CCX78836.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
two-component system sensor histidine kinase/response
L3_098_000M1_scaffold_12_11
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18101..21181
DNA (3081bp) protein (1027aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BC59_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EEC95982.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
TonB-dependent receptor plug
L3_098_000M1_scaffold_12_12
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21202..22800
DNA (1599bp) protein (533aa)
SusD family protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BC60_9PORP
SusD family protein {ECO:0000313|EMBL:EEC95983.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
RagB/SusD domain-containing protein
L3_098_000M1_scaffold_12_13
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22996..24162
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K6A9R3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12408.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L3_098_000M1_scaffold_12_14
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24159..27497
DNA (3339bp) protein (1113aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5YFQ8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12407.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L3_098_000M1_scaffold_12_15
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27532..30492)
DNA (2961bp) protein (987aa)
Exonuclease SbcC n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZLN3_9PORP
Exonuclease SbcC {ECO:0000313|EMBL:EKN12406.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
ATP-dependent exonuclease sbcC
L3_098_000M1_scaffold_12_16
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30489..31733)
DNA (1245bp) protein (415aa)
Exonuclease SbcCD, D subunit n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BC65_9PORP
Exonuclease SbcCD, D subunit {ECO:0000313|EMBL:EEC95969.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
exonuclease
L3_098_000M1_scaffold_12_17
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31870..33540
DNA (1671bp) protein (557aa)
AspT/YidE/YbjL antiporter duplication domain-containing protein n=3 Tax=Parabacteroides RepID=K5Z9V2_9PORP
TrkA C-terminal domain protein {ECO:0000313|EMBL:EEC95975.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L3_098_000M1_scaffold_12_18
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33541..34872)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DJ78_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78844.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L3_098_000M1_scaffold_12_19
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35014..35673)
DNA (660bp) protein (220aa)
Rubredoxin n=7 Tax=Parabacteroides RepID=B7BC73_9PORP
Rubredoxin {ECO:0000313|EMBL:EEC95977.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
rubrerythrin
L3_098_000M1_scaffold_12_20
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35756..36814
DNA (1059bp) protein (353aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Deoxyribose-phosphate aldolase n=2 Tax=Parabacteroides johnsonii RepID=B7BC74_9PORP
Deoxyribose-phosphate aldolase {ECO:0000313|EMBL:EEC95978.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
L3_098_000M1_scaffold_12_21
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36879..38984)
DNA (2106bp) protein (702aa)
Peptidase, S9A/B/C family, catalytic domain protein n=2 Tax=Parabacteroides johnsonii RepID=B7BC75_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12400.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
peptidase
L3_098_000M1_scaffold_12_22
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39091..39579
DNA (489bp) protein (163aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5Z9U8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12399.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L3_098_000M1_scaffold_12_23
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39673..39819)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BC77_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC95953.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
L3_098_000M1_scaffold_12_24
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39885..40505)
DNA (621bp) protein (207aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BC78_9PORP
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EEC95954.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
transcriptional regulator, Crp/Fnr family
L3_098_000M1_scaffold_12_25
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40648..41631)
DNA (984bp) protein (328aa)
Caspase domain protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BC79_9PORP
Caspase domain protein {ECO:0000313|EMBL:EEC95955.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
exported protein of unknown function
L3_098_000M1_scaffold_12_26
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41628..42992)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=R5DEQ9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78668.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L3_098_000M1_scaffold_12_27
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43001..43948)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BC82_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC95958.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L3_098_000M1_scaffold_12_28
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43962..44393)
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=B7BC83_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78666.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
L3_098_000M1_scaffold_12_29
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44398..45573)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DEM9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78665.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
L3_098_000M1_scaffold_12_30
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45573..46415)
DNA (843bp) protein (281aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=B7BC85_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78664.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
PEGA domain protein
Displaying items 1-30 of 142 in total

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