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L3_098_000M1_scaffold_14

Search features with annotation key words

Displaying items 1-30 of 147 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_000M1_scaffold_14_1
unknown

Not on your lists

50..355
DNA (306bp) protein (102aa)

This feature has no annotations

L3_098_000M1_scaffold_14_2
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(255..668)
DNA (414bp) protein (138aa)
MatE protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VLD6_9FIRM
MatE protein {ECO:0000313|EMBL:EFV16249.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
MATE efflux family protein
L3_098_000M1_scaffold_14_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(661..1110)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47924.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
MarR family transcriptional regulator
L3_098_000M1_scaffold_14_4
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1199..1450)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NNH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS81582.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L3_098_000M1_scaffold_14_5
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1591..1824)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NF61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS81581.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
mob; Mob
L3_098_000M1_scaffold_14_6
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2341..3867)
DNA (1527bp) protein (509aa)
Divergent AAA domain protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S2P4_9FIRM
Divergent AAA domain protein {ECO:0000313|EMBL:EFF67499.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
hypothetical protein
L3_098_000M1_scaffold_14_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3899..7156)
DNA (3258bp) protein (1086aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum (strain Loch Maree / Type A3) RepID=B1KV93_CLOBM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA53940.1}; TaxID=498214 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Loch Maree / Type A3).;"
L3_098_000M1_scaffold_14_8
unknown

Not on your lists

comp(7146..7649)
DNA (504bp) protein (168aa)

This feature has no annotations

L3_098_000M1_scaffold_14_9
unknown

Not on your lists

comp(7600..8070)
DNA (471bp) protein (157aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P0S1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL38233.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_098_000M1_scaffold_14_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8155..10362)
DNA (2208bp) protein (736aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CGQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31639.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
superfamily II DNA/RNA helicase
L3_098_000M1_scaffold_14_11
[Eubacterium] infirmum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10356..11987)
DNA (1632bp) protein (544aa)
adenine-specific DNA-methyltransferase (EC:2.1.1.72)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PKZ9_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EHO85733.1}; TaxID=883109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium infirmum F0142.;"
L3_098_000M1_scaffold_14_12
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11997..14690)
DNA (2694bp) protein (898aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
Superfamily I DNA and RNA helicase n=1 Tax=Kordia algicida OT-1 RepID=A9EBT7_9FLAO
ATP-dependent DNA helicase UvrD/PcrA
L3_098_000M1_scaffold_14_13
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14777..15004)
DNA (228bp) protein (76aa)
Predicted transcriptional regulator n=1 Tax=Clostridium sp. CAG:632 RepID=R5K9X1_9CLOT
Predicted transcriptional regulator {ECO:0000313|EMBL:CCY57822.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
Predicted transcriptional regulator
L3_098_000M1_scaffold_14_14
unknown

Not on your lists

comp(15105..15284)
DNA (180bp) protein (60aa)

This feature has no annotations

L3_098_000M1_scaffold_14_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15699..16610
DNA (912bp) protein (304aa)
Site-specific recombinase XerD n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KT57_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBL10059.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_098_000M1_scaffold_14_16
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16768..18342)
DNA (1575bp) protein (525aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E224_9FIRM
L3_098_000M1_scaffold_14_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18622..19209
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JKU3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK94240.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_098_000M1_scaffold_14_18
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19276..19563
DNA (288bp) protein (96aa)
Stage III sporulation protein D n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZCQ2_EUBR3
stage III sporulation protein D
Stage III sporulation protein D {ECO:0000313|EMBL:ACR74407.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_098_000M1_scaffold_14_19
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19651..20802)
DNA (1152bp) protein (384aa)
Endoglucanase (EC:3.2.1.4)
Endoglucanase {ECO:0000313|EMBL:CBK94241.1}; EC=3.2.1.4 {ECO:0000313|EMBL:CBK94241.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Endoglucanase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JKU4_9FIRM
L3_098_000M1_scaffold_14_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20824..23406)
DNA (2583bp) protein (861aa)
copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4)
Copper-(Or silver)-translocating P-type ATPase {ECO:0000313|EMBL:CBK94242.1}; EC=3.6.3.4 {ECO:0000313|EMBL:CBK94242.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Copper-(Or silver)-translocating P-type ATPase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JKU5_9FIRM
L3_098_000M1_scaffold_14_21
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23463..23840)
DNA (378bp) protein (126aa)
Heavy-metal-associated domain n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E220_9FIRM
Heavy-metal-associated domain.
Heavy-metal-associated domain {ECO:0000313|EMBL:CBK89460.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_098_000M1_scaffold_14_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23865..24176)
DNA (312bp) protein (104aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E219_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBK89459.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_098_000M1_scaffold_14_23
unknown

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comp(24549..24650)
DNA (102bp) protein (34aa)

This feature has no annotations

L3_098_000M1_scaffold_14_24
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24904..26097)
DNA (1194bp) protein (398aa)
PLP-dependent aminotransferase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TEP9_9FIRM
aspartate aminotransferase
PLP-dependent aminotransferase {ECO:0000313|EMBL:CDC71898.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_098_000M1_scaffold_14_25
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26184..28985)
DNA (2802bp) protein (934aa)
Translation elongation factor G n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZCJ4_EUBR3
Translation elongation factor G {ECO:0000313|EMBL:ACR74349.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
translation elongation factor G
L3_098_000M1_scaffold_14_26
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29213..30541
DNA (1329bp) protein (443aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6TVH0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK94271.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_098_000M1_scaffold_14_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30993..31787)
DNA (795bp) protein (265aa)
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974, ECO:0000313|EMBL:CBK94272.1};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Methionine aminopeptidase n=4 Tax=Eubacterium RepID=C4ZC56_EUBR3
L3_098_000M1_scaffold_14_28
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32088..32528)
DNA (441bp) protein (147aa)
Uncharacterized conserved protein n=4 Tax=Eubacterium RepID=D4JKX6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74344.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_098_000M1_scaffold_14_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33041..34312)
DNA (1272bp) protein (424aa)
Cell wall-associated hydrolases (Invasion-associated proteins) n=1 Tax=Eubacterium rectale M104/1 RepID=D4JKX7_9FIRM
Cell wall-associated hydrolases (invasion-associated proteins)
Cell wall-associated hydrolases (Invasion-associated proteins) {ECO:0000313|EMBL:CBK94274.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_098_000M1_scaffold_14_30
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34504..36078)
DNA (1575bp) protein (525aa)
LysM domain n=1 Tax=Eubacterium rectale M104/1 RepID=D4JKX8_9FIRM
LysM domain {ECO:0000313|EMBL:CBK94275.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
LysM domain.
Displaying items 1-30 of 147 in total

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